Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28196	Snx4	sorting nexin 4	16		69150
Gene Ontology	endocytosis | intracellular protein transport | intracellular signaling cascade | protein transport | protein transporter activity | transport
Human Homolog	SNX4[sorting nexin 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 44 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAACCCTGTC (15) 3.3 0.0033 P8 Cb GC TTTAAAATGT (5) 1.6 0.0016 Cb medulloblastoma CCATATTATG (2) 2.3 0.0023 P8 GC+1d culture CCATATTATG (2) 5.7 0.0057 P8 GC+1d culture AAACCCTGTC (15) 3.4 0.0034 P8 GC+1d culture TTTAAAATGT (5) 3.4 0.0034 P8 GC+SHH+1d culture AAACCCTGTC (15) 1.2 0.0012 P8 GC+SHH+1d culture CCATATTATG (2) 1.2 0.0012 P8 GC+SHH+1d culture TTTAAAATGT (5) 1.2 0.0012 P1 cortex CCATATTATG (2) 9.1 0.0091 P1 cortex AAACCCTGTC (15) 4.5 0.0045 P1 cortex TTTAAAATGT (5) 4.5 0.0045 Hypothalamus CCATATTATG (2) 1.8 0.0018 E12.5 retina CCATATTATG (2) 7.5 0.0075 E14.5 retina CCATATTATG (2) 7.3 0.0073 E14.5 retina AAACCCTGTC (15) 3.6 0.0036 E14.5 retina TTTAAAATGT (5) 3.6 0.0036 E16.5 retina CCATATTATG (2) 10.9 0.0109 E16.5 retina AAACCCTGTC (15) 1.8 0.0018 E16.5 retina TTTAAAATGT (5) 1.8 0.0018 E18.5 retina AAACCCTGTC (15) 1.8 0.0018 E18.5 retina CCATATTATG (2) 1.8 0.0018 P0.5 retina AAACCCTGTC (15) 3.9 0.0039 P0.5 retina CCATATTATG (2) 3.9 0.0039 P2.5 retina CCATATTATG (2) 7 0.007 P2.5 retina AAACCCTGTC (15) 1.8 0.0018 P2.5 retina GAACAAATCA (8) 1.8 0.0018 P2.5 retina TTTAAAATGT (5) 1.8 0.0018 P4.5 retina CCATATTATG (2) 9.9 0.0099 P4.5 retina GAACAAATCA (8) 2 0.002 P4.5 retina TTTAAAATGT (5) 2 0.002 P6.5 retina CCATATTATG (2) 11.7 0.0117 P10.5 crx- retina CCATATTATG (2) 5.6 0.0056 P10.5 crx- retina AAACCCTGTC (15) 1.9 0.0019 P10.5 crx- retina GAACAAATCA (8) 1.9 0.0019 P10.5 crx- retina TTTAAAATGT (5) 1.9 0.0019 P10.5 crx+ retina AAACCCTGTC (15) 3.8 0.0038 P10.5 crx+ retina CCATATTATG (2) 3.8 0.0038 P10.5 crx+ retina TTTAAAATGT (5) 1.9 0.0019 Adult retinal CCATATTATG (2) 16.7 0.0167 Adult retinal AAACCCTGTC (15) 3.7 0.0037 Adult retinal TTTAAAATGT (5) 3.7 0.0037 Adult retinal GAACAAATCA (8) 1.9 0.0019 ONL CCATATTATG (2) 5.7 0.0057