Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28240	Snx6	sorting nexin 6	12		72183
Gene Ontology	intracellular protein transport | protein transport | protein transporter activity | transport
Human Homolog	SNX6[sorting nexin 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 39 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGTGTTCCT CTCCTTGTAT GTGGCAACTA 14.7 0.0147 Cb medulloblastoma AGGTGTTCCT CTCCTTGTAT 11.5 0.0115 P8 GC+1d culture CTCCTTGTAT GTTAAGTCAG 7.9 0.0079 P8 GC+SHH+1d culture AAAGAACTAA CTCCTTGTAT 5.9 0.0059 3T3 fibroblasts CTCCTTGTAT GTTAAGTCAG 7 0.007 E15 cortex AGGTGTTCCT 9.9 0.0099 P1 cortex AGGTGTTCCT CTCCTTGTAT 9 0.009 Hypothalamus AAAGAACTAA AGGTGTTCCT CTCCTTGTAT GTGGCAACTA 9 0.009 E12.5 retina AAAGAACTAA CTCCTTGTAT GTGGCAACTA GTTAAGTCAG 20.7 0.0207 E14.5 retina CTCCTTGTAT 5.5 0.0055 E16.5 retina CTCCTTGTAT GTGGCAACTA GTTAAGTCAG 14.5 0.0145 E18.5 retina GTGGCAACTA 1.8 0.0018 P0.5 retina CTCCTTGTAT 7.9 0.0079 P2.5 retina CTCCTTGTAT 5.3 0.0053 P4.5 retina AAAGAACTAA CTCCTTGTAT GTGGCAACTA 13.9 0.0139 P6.5 retina CTCCTTGTAT GTGGCAACTA 10 0.01 P10.5 crx- retina GTGGCAACTA 1.9 0.0019 P10.5 crx+ retina AGGTGTTCCT CTCCTTGTAT 9.6 0.0096 Adult retinal AAAGAACTAA CTCCTTGTAT 3.8 0.0038