Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28357	Map1lc3b	microtubule-associated protein 1 light chain 3 beta	8		67443
Gene Ontology	microtubule-based process | protein binding
Human Homolog	MAP1LC3B[microtubule-associated protein 1 light chain 3 beta]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 85 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCGAGCTCA CAAGTGCACT (3) CAGCTGTCTT CAGCTGTTTA (2) CAGCTTTTTT (2) CAGTTATTTT (4) GACTGAAGCC (2) 71.8 0.0718 Cb medulloblastoma AGCGAGCTCA CAGCTCGCTG CAGCTGTCTT CAGGGAAGGT CAGTTATTTT (4) GGCAGCTGTC 30 0.03 P8 GC+1d culture CAAGTGCACT (3) CAGCTCGCTG CAGCTGTCTT CAGCTGTTTA (2) CAGCTTTTTT (2) CAGTTATTTT (4) GACTGAAGCC (2) TCCCTGTGCA 87.7 0.0877 P8 GC+SHH+1d culture CAAAGTGCAC CAAGTGCACT (3) CAGCTGTCTT CAGCTGTTTA (2) CAGCTTTTTT (2) CAGGGAAGGT CAGTTATTTT (4) GGCAGCTGTC 80.7 0.0807 3T3 fibroblasts CAAGTGCACT (3) CAGCTGTCTT GGCAGCTGTC 21 0.021 E15 cortex CAAGTGCACT (3) CAGCTCGCTG CAGCTGTCTT CAGCTTTTTT (2) 34.5 0.0345 P1 cortex CAGCTGTCTT 13.6 0.0136 Hypothalamus CAAGTGCACT (3) CAGCTGTCTT CAGCTGTTTA (2) CAGGGAAGGT GACTGAAGCC (2) 23.5 0.0235 E12.5 retina CAAGTGCACT (3) CAGCTGTCTT CAGCTTTTTT (2) 16.9 0.0169 E14.5 retina AGCGAGCTCA CAAGTGCACT (3) CAGCTGTCTT CAGCTTTTTT (2) 27.3 0.0273 E16.5 retina CAAGTGCACT (3) CAGCTGTCTT 20 0.02 E18.5 retina CAAAGTGCAC CAAGTGCACT (3) CAGCTGTCTT CAGGGAAGGT 18.2 0.0182 P0.5 retina CAAGTGCACT (3) CAGCTGTCTT CAGCTGTTTA (2) CAGGGAAGGT 33.4 0.0334 P2.5 retina CAAGTGCACT (3) CAGCTGTCTT CAGCTGTTTA (2) CAGTTATTTT (4) 29.9 0.0299 P4.5 retina CAAGTGCACT (3) CAGCTGTCTT CAGCTGTTTA (2) CAGCTTTTTT (2) 33.8 0.0338 P6.5 retina CAAAGTGCAC CAAGTGCACT (3) CAGCTGTCTT CAGCTGTTTA (2) CAGCTTTTTT (2) CAGGGAAGGT CAGTTATTTT (4) 30.1 0.0301 P10.5 crx- retina CAAGTGCACT (3) CAGCTGTCTT TCCCTGTGCA 27.9 0.0279 P10.5 crx+ retina CAAGTGCACT (3) CAGCTGTCTT CAGGGAAGGT 26.9 0.0269 Adult retinal CAAGTGCACT (3) CAGCTGTCTT TCCCTGTGCA 13.1 0.0131 ONL CAAGTGCACT (3) CAGCTGTCTT 7.6 0.0076