Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28465	Lrp10	low-density lipoprotein receptor-related protein 10	14		65107
Gene Ontology	coated pit | endocytosis | extracellular space | integral to membrane | integral to membrane | lipid metabolism | lipid transport | low-density lipoprotein receptor activity | receptor activity
Human Homolog	LRP10[low density lipoprotein receptor-related protein 10]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCAGCTCACA (24) 8.2 0.0082 P8 Cb GC AGAATAAAAA (7) 6.5 0.0065 P8 Cb GC GCTGAGCCAG (6) 1.6 0.0016 P8 Cb GC GGTGTGTGAT 1.6 0.0016 P8 Cb GC TCCTCATCCT (4) 1.6 0.0016 Cb medulloblastoma GCAGCTCACA (24) 6.9 0.0069 Cb medulloblastoma AGAATAAAAA (7) 4.6 0.0046 Cb medulloblastoma TGTATTGAAT (3) 4.6 0.0046 Cb medulloblastoma TCCTCATCCT (4) 2.3 0.0023 P8 GC+1d culture GCAGCTCACA (24) 10.3 0.0103 P8 GC+1d culture AGAATAAAAA (7) 3.4 0.0034 P8 GC+1d culture CCTGTGAGGG (4) 1.1 0.0011 P8 GC+1d culture GCTGAGCCAG (6) 1.1 0.0011 P8 GC+SHH+1d culture GCAGCTCACA (24) 10.5 0.0105 P8 GC+SHH+1d culture CCTGTGAGGG (4) 3.5 0.0035 P8 GC+SHH+1d culture GGTGTGTGAT 2.3 0.0023 P8 GC+SHH+1d culture AGAATAAAAA (7) 1.2 0.0012 P8 GC+SHH+1d culture TCCTCATCCT (4) 1.2 0.0012 3T3 fibroblasts GCAGCTCACA (24) 14 0.014 3T3 fibroblasts CCTGTGAGGG (4) 7 0.007 E15 cortex GCAGCTCACA (24) 24.7 0.0247 E15 cortex GCTGAGCCAG (6) 4.9 0.0049 P1 cortex GCAGCTCACA (24) 4.5 0.0045 Hypothalamus AGAATAAAAA (7) 5.4 0.0054 Hypothalamus GCAGCTCACA (24) 5.4 0.0054 Hypothalamus AGAAACAGGC (2) 1.8 0.0018 Hypothalamus GACAACTCCA (6) 1.8 0.0018 Hypothalamus GGCCAGGGCT (6) 1.8 0.0018 Hypothalamus GGTGTGTGAT 1.8 0.0018 E12.5 retina GCAGCTCACA (24) 9.4 0.0094 E12.5 retina GGTGTGATGA (6) 1.9 0.0019 E14.5 retina GCAGCTCACA (24) 40.1 0.0401 E14.5 retina TGTATTGAAT (3) 3.6 0.0036 E14.5 retina GACAACTCCA (6) 1.8 0.0018 E14.5 retina TCCTCATCCT (4) 1.8 0.0018 E16.5 retina GCAGCTCACA (24) 23.5 0.0235 E16.5 retina AGAAACAGGC (2) 1.8 0.0018 E18.5 retina GCAGCTCACA (24) 14.6 0.0146 E18.5 retina AGAATAAAAA (7) 1.8 0.0018 E18.5 retina TGTATTGAAT (3) 1.8 0.0018 P0.5 retina GCAGCTCACA (24) 15.7 0.0157 P0.5 retina GGTGTGTGAT 3.9 0.0039 P2.5 retina GCAGCTCACA (24) 7 0.007 P2.5 retina AGAATAAAAA (7) 3.5 0.0035 P2.5 retina AGAAACAGGC (2) 1.8 0.0018 P2.5 retina GACAACTCCA (6) 1.8 0.0018 P4.5 retina GCAGCTCACA (24) 5.9 0.0059 P4.5 retina AGAATAAAAA (7) 4 0.004 P6.5 retina GCAGCTCACA (24) 15 0.015 P6.5 retina GGTGTGATGA (6) 3.3 0.0033 P6.5 retina AGAATAAAAA (7) 1.7 0.0017 P6.5 retina GGCCAGGGCT (6) 1.7 0.0017 P6.5 retina TGTATTGAAT (3) 1.7 0.0017 P10.5 crx- retina GCAGCTCACA (24) 24.2 0.0242 P10.5 crx- retina AGAATAAAAA (7) 3.7 0.0037 P10.5 crx+ retina GCAGCTCACA (24) 17.3 0.0173 P10.5 crx+ retina AGAATAAAAA (7) 3.8 0.0038 Adult retinal GCAGCTCACA (24) 18.5 0.0185 Adult retinal GGTGTGATGA (6) 3.7 0.0037 Adult retinal GGTGTGTGAT 3.7 0.0037 Adult retinal AGAATAAAAA (7) 1.9 0.0019 Adult retinal GACAACTCCA (6) 1.9 0.0019 Adult retinal GGCCAGGGCT (6) 1.9 0.0019 Adult retinal TTGTGAGAGA 1.9 0.0019 ONL GCAGCTCACA (24) 7.7 0.0077 ONL AGAATAAAAA (7) 5.7 0.0057 ONL TTGTGAGAGA 3.8 0.0038