Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.284710	9030419F21Rik	RIKEN cDNA 9030419F21 gene	15		71512
Mm.284710	5730502D15Rik	RIKEN cDNA 5730502D15 gene	15		67976
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 133 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCTCTGGTG (11) 24.5 0.0245 P8 Cb GC GGACCACTGA (3) 4.9 0.0049 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC TCGAAGGTGT (6) 3.3 0.0033 P8 Cb GC TGTACAGGCT (2) 3.3 0.0033 P8 Cb GC CTGCTGACAG (5) 1.6 0.0016 P8 Cb GC TGGCATTGCC (3) 1.6 0.0016 Cb medulloblastoma GCCTCTGGTG (11) 16.2 0.0162 Cb medulloblastoma ACCAGTCCCC (4) 4.6 0.0046 Cb medulloblastoma TTTTTAAGTA (4) 4.6 0.0046 Cb medulloblastoma CTGCTGACAG (5) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture GCCTCTGGTG (11) 22.8 0.0228 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture TTTTTAAGTA (4) 3.4 0.0034 P8 GC+1d culture GGACCACTGA (3) 2.3 0.0023 P8 GC+1d culture TGTACAGGCT (2) 2.3 0.0023 P8 GC+1d culture ACCAGTCCCC (4) 1.1 0.0011 P8 GC+1d culture CCTCTAATCC (8) 1.1 0.0011 P8 GC+1d culture GGAAGTAGCT (4) 1.1 0.0011 P8 GC+SHH+1d culture GCCTCTGGTG (11) 26.9 0.0269 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture GGACCACTGA (3) 4.7 0.0047 P8 GC+SHH+1d culture TGTACAGGCT (2) 3.5 0.0035 P8 GC+SHH+1d culture ATCCTGTCTG (9) 2.3 0.0023 P8 GC+SHH+1d culture GCAACCATCC (5) 2.3 0.0023 P8 GC+SHH+1d culture CCTCTAATCC (8) 1.2 0.0012 P8 GC+SHH+1d culture GGAAGTAGCT (4) 1.2 0.0012 3T3 fibroblasts GCCTCTGGTG (11) 31.5 0.0315 E15 cortex CCTCTAATCC (8) 4.9 0.0049 E15 cortex GCTGTGGCAA (5) 4.9 0.0049 E15 cortex TGTACAGGCT (2) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex CCTCTAATCC (8) 9.1 0.0091 P1 cortex GCCTCTGGTG (11) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus GCCTCTGGTG (11) 16.3 0.0163 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus TGTACAGGCT (2) 3.6 0.0036 Hypothalamus AATGGGTGGC (5) 1.8 0.0018 Hypothalamus ACCAAGGTAA (4) 1.8 0.0018 Hypothalamus CCTCTAATCC (8) 1.8 0.0018 Hypothalamus GCTGTGGCAA (5) 1.8 0.0018 Hypothalamus TTTTTAAGTA (4) 1.8 0.0018 E12.5 retina GCCTCTGGTG (11) 56.3 0.0563 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina AATGGCTGGC (6) 1.9 0.0019 E12.5 retina ATCCTGTCTG (9) 1.9 0.0019 E12.5 retina GAGCAGTGAG (6) 1.9 0.0019 E12.5 retina GGAAGTAGCT (4) 1.9 0.0019 E12.5 retina TGGCATTGCC (3) 1.9 0.0019 E14.5 retina GCCTCTGGTG (11) 23.7 0.0237 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina CCTCTAATCC (8) 3.6 0.0036 E14.5 retina GGAAGTAGCT (4) 3.6 0.0036 E14.5 retina TGGCATTGCC (3) 1.8 0.0018 E14.5 retina TGTACAGGCT (2) 1.8 0.0018 E16.5 retina GCCTCTGGTG (11) 39.8 0.0398 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina AATGGGTGGC (5) 3.6 0.0036 E16.5 retina GAGCAGTGAG (6) 3.6 0.0036 E16.5 retina CCTCTAATCC (8) 1.8 0.0018 E16.5 retina GCAACCATCC (5) 1.8 0.0018 E16.5 retina GGACCACTGA (3) 1.8 0.0018 E16.5 retina TGTACAGGCT (2) 1.8 0.0018 E18.5 retina GCCTCTGGTG (11) 52.8 0.0528 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina TTTTTAAGTA (4) 3.6 0.0036 E18.5 retina CCTCTAATCC (8) 1.8 0.0018 P0.5 retina GCCTCTGGTG (11) 45.1 0.0451 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina GGAAGTAGCT (4) 5.9 0.0059 P0.5 retina TGTACAGGCT (2) 5.9 0.0059 P0.5 retina AATGGCTGGC (6) 2 0.002 P0.5 retina AATGGGTGGC (5) 2 0.002 P0.5 retina CCTCTAATCC (8) 2 0.002 P0.5 retina GAGCAGTGAG (6) 2 0.002 P0.5 retina TTTTTAAGTA (4) 2 0.002 P2.5 retina GCCTCTGGTG (11) 45.8 0.0458 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina CCTCTAATCC (8) 3.5 0.0035 P2.5 retina GAGCAGTGAG (6) 3.5 0.0035 P2.5 retina GGAAGTAGCT (4) 3.5 0.0035 P2.5 retina TGTACAGGCT (2) 3.5 0.0035 P2.5 retina ACCAGTCCCC (4) 1.8 0.0018 P2.5 retina GCTGTGGCAA (5) 1.8 0.0018 P2.5 retina TCGAAGGTGT (6) 1.8 0.0018 P2.5 retina TGGCATTGCC (3) 1.8 0.0018 P4.5 retina GCCTCTGGTG (11) 31.7 0.0317 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina TTTTTAAGTA (4) 4 0.004 P4.5 retina ACCAAGGTAA (4) 2 0.002 P4.5 retina CTGCTGACAG (5) 2 0.002 P4.5 retina GCAACCATCC (5) 2 0.002 P4.5 retina GGAAGTAGCT (4) 2 0.002 P4.5 retina TCGAAGGTGT (6) 2 0.002 P4.5 retina TGTACAGGCT (2) 2 0.002 P6.5 retina GCCTCTGGTG (11) 26.7 0.0267 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina GGAAGTAGCT (4) 3.3 0.0033 P6.5 retina CCTCTAATCC (8) 1.7 0.0017 P6.5 retina TCGAAGGTGT (6) 1.7 0.0017 P6.5 retina TGTACAGGCT (2) 1.7 0.0017 P10.5 crx- retina GCCTCTGGTG (11) 18.6 0.0186 P10.5 crx- retina GGAAGTAGCT (4) 7.4 0.0074 P10.5 crx- retina AATGGCTGGC (6) 3.7 0.0037 P10.5 crx- retina ATCCTGTCTG (9) 3.7 0.0037 P10.5 crx- retina ACCAGTCCCC (4) 1.9 0.0019 P10.5 crx- retina TGTACAGGCT (2) 1.9 0.0019 P10.5 crx- retina TTTTTAAGTA (4) 1.9 0.0019 P10.5 crx+ retina GCCTCTGGTG (11) 30.8 0.0308 P10.5 crx+ retina ATCCTGTCTG (9) 3.8 0.0038 P10.5 crx+ retina GGAAGTAGCT (4) 3.8 0.0038 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina TGGCATTGCC (3) 1.9 0.0019 P10.5 crx+ retina TGTACAGGCT (2) 1.9 0.0019 Adult retinal GCCTCTGGTG (11) 24.1 0.0241 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal GGAAGTAGCT (4) 5.6 0.0056 Adult retinal TGTACAGGCT (2) 5.6 0.0056 Adult retinal CCTCTAATCC (8) 3.7 0.0037 Adult retinal AATGGGTGGC (5) 1.9 0.0019 Adult retinal ACCAAGGTAA (4) 1.9 0.0019 Adult retinal ACCAGTCCCC (4) 1.9 0.0019 Adult retinal CTGCTGACAG (5) 1.9 0.0019 ONL GCCTCTGGTG (11) 13.4 0.0134 ONL GCAACCATCC (5) 3.8 0.0038 ONL TGTACAGGCT (2) 3.8 0.0038 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL ACCAAGGTAA (4) 1.9 0.0019 ONL ACCAGTCCCC (4) 1.9 0.0019 ONL CCTCTAATCC (8) 1.9 0.0019 ONL GCTGTGGCAA (5) 1.9 0.0019