Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28480	Fkbp3	FK506 binding protein 3	12		30795
Mm.28480	C730036B14Rik	RIKEN cDNA C730036B14 gene	12		104806
Gene Ontology	ATP binding | ATP dependent helicase activity | helicase activity | hydrolase activity | nucleic acid binding
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 140 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GATTGTCAAA (2) 17.9 0.0179 P8 Cb GC GATTGTCTTG (6) 16.3 0.0163 P8 Cb GC AGACCCTGTC (35) 6.5 0.0065 P8 Cb GC CACAATCTCC (7) 1.6 0.0016 P8 Cb GC GACCGTGGAG (4) 1.6 0.0016 P8 Cb GC TGGCTGCTGG (16) 1.6 0.0016 P8 Cb GC TTTCTCAAAA (4) 1.6 0.0016 Cb medulloblastoma AGACCCTGTC (35) 20.8 0.0208 Cb medulloblastoma GATTGTCAAA (2) 6.9 0.0069 Cb medulloblastoma TTTCTCAAAA (4) 4.6 0.0046 Cb medulloblastoma CCTTTCTGCG (3) 2.3 0.0023 Cb medulloblastoma GCAAAAAACA (7) 2.3 0.0023 P8 GC+1d culture GATTGTCAAA (2) 13.7 0.0137 P8 GC+1d culture GATTGTCTTG (6) 9.1 0.0091 P8 GC+1d culture AGACCCTGTC (35) 4.6 0.0046 P8 GC+1d culture GACAGTGGAG (9) 2.3 0.0023 P8 GC+1d culture CACAATCTCC (7) 1.1 0.0011 P8 GC+1d culture CCTTTCTGCG (3) 1.1 0.0011 P8 GC+1d culture GACCGTGGAG (4) 1.1 0.0011 P8 GC+1d culture TGGCTGCTGG (16) 1.1 0.0011 P8 GC+1d culture TTTCTCAAAA (4) 1.1 0.0011 P8 GC+SHH+1d culture GATTGTCAAA (2) 26.9 0.0269 P8 GC+SHH+1d culture GATTGTCTTG (6) 12.9 0.0129 P8 GC+SHH+1d culture TTTCTCAAAA (4) 3.5 0.0035 P8 GC+SHH+1d culture GACAGTGGAG (9) 2.3 0.0023 P8 GC+SHH+1d culture ACACTTTTAT (7) 1.2 0.0012 P8 GC+SHH+1d culture AGACCCTGTC (35) 1.2 0.0012 P8 GC+SHH+1d culture CACAATCTCC (7) 1.2 0.0012 P8 GC+SHH+1d culture GACCGTGGAG (4) 1.2 0.0012 P8 GC+SHH+1d culture TGGCTGCTGG (16) 1.2 0.0012 3T3 fibroblasts CACAATCTCC (7) 10.5 0.0105 3T3 fibroblasts GACCGTGGAG (4) 7 0.007 3T3 fibroblasts GACAGTGGAG (9) 3.5 0.0035 3T3 fibroblasts TGGCTGCTGG (16) 3.5 0.0035 E15 cortex AGACCCTGTC (35) 14.8 0.0148 E15 cortex GACCGTGGAG (4) 14.8 0.0148 E15 cortex GACAGTGGAG (9) 9.9 0.0099 E15 cortex GATTGTCAAA (2) 4.9 0.0049 E15 cortex GATTGTCTTG (6) 4.9 0.0049 E15 cortex TGGCTGCTGG (16) 4.9 0.0049 P1 cortex AGACCCTGTC (35) 4.5 0.0045 P1 cortex TTTCTCAAAA (4) 4.5 0.0045 Hypothalamus GATTGTCAAA (2) 32.6 0.0326 Hypothalamus GATTGTCTTG (6) 14.5 0.0145 Hypothalamus CCTTTCTGCG (3) 3.6 0.0036 Hypothalamus TGGCTGCTGG (16) 3.6 0.0036 Hypothalamus TTTCTCAAAA (4) 3.6 0.0036 Hypothalamus ACACCTTTTA (4) 1.8 0.0018 Hypothalamus AGACCCTGTC (35) 1.8 0.0018 Hypothalamus GACCGTGGAG (4) 1.8 0.0018 E12.5 retina GATTGTCAAA (2) 31.9 0.0319 E12.5 retina GATTGTCTTG (6) 20.7 0.0207 E12.5 retina TTTCTCAAAA (4) 13.1 0.0131 E12.5 retina AGACCCTGTC (35) 5.6 0.0056 E12.5 retina CCTTTCTGCG (3) 3.8 0.0038 E12.5 retina ACACTTTTAT (7) 1.9 0.0019 E12.5 retina GGGGCTTATA (2) 1.9 0.0019 E12.5 retina TGGCTGCTGG (16) 1.9 0.0019 E14.5 retina TGGCTGCTGG (16) 23.7 0.0237 E14.5 retina GATTGTCTTG (6) 20 0.02 E14.5 retina GATTGTCAAA (2) 16.4 0.0164 E14.5 retina ACACTTTTAT (7) 5.5 0.0055 E14.5 retina AGACCCTGTC (35) 5.5 0.0055 E14.5 retina CCTTTCTGCG (3) 3.6 0.0036 E14.5 retina TTTCTCAAAA (4) 3.6 0.0036 E14.5 retina GACAGTGGAG (9) 1.8 0.0018 E16.5 retina GATTGTCAAA (2) 14.5 0.0145 E16.5 retina GATTGTCTTG (6) 12.7 0.0127 E16.5 retina TGGCTGCTGG (16) 7.2 0.0072 E16.5 retina TTTCTCAAAA (4) 7.2 0.0072 E16.5 retina ACACTTTTAT (7) 3.6 0.0036 E16.5 retina AGACCCTGTC (35) 3.6 0.0036 E16.5 retina GACCGTGGAG (4) 3.6 0.0036 E16.5 retina CCTTTCTGCG (3) 1.8 0.0018 E16.5 retina GACAGTGGAG (9) 1.8 0.0018 E18.5 retina GATTGTCAAA (2) 63.7 0.0637 E18.5 retina GATTGTCTTG (6) 45.5 0.0455 E18.5 retina AGACCCTGTC (35) 10.9 0.0109 E18.5 retina CCTTTCTGCG (3) 3.6 0.0036 E18.5 retina GACAGTGGAG (9) 1.8 0.0018 E18.5 retina TGGCTGCTGG (16) 1.8 0.0018 E18.5 retina TTTCTCAAAA (4) 1.8 0.0018 P0.5 retina GATTGTCAAA (2) 23.6 0.0236 P0.5 retina GATTGTCTTG (6) 5.9 0.0059 P0.5 retina GGGGCTTATA (2) 3.9 0.0039 P0.5 retina TTTCTCAAAA (4) 3.9 0.0039 P0.5 retina AGACCCTGTC (35) 2 0.002 P0.5 retina CACAATCTCC (7) 2 0.002 P0.5 retina CCTTTCTGCG (3) 2 0.002 P0.5 retina GACAGTGGAG (9) 2 0.002 P0.5 retina GCAAAAAACA (7) 2 0.002 P2.5 retina GATTGTCAAA (2) 21.1 0.0211 P2.5 retina AGACCCTGTC (35) 12.3 0.0123 P2.5 retina GATTGTCTTG (6) 10.6 0.0106 P2.5 retina TGGCTGCTGG (16) 8.8 0.0088 P2.5 retina CCTTTCTGCG (3) 7 0.007 P2.5 retina TTTCTCAAAA (4) 7 0.007 P4.5 retina GATTGTCAAA (2) 21.8 0.0218 P4.5 retina GATTGTCTTG (6) 11.9 0.0119 P4.5 retina AGACCCTGTC (35) 7.9 0.0079 P4.5 retina CACAATCTCC (7) 4 0.004 P4.5 retina TTTCTCAAAA (4) 4 0.004 P4.5 retina GCAAAAAACA (7) 2 0.002 P4.5 retina TGGCTGCTGG (16) 2 0.002 P6.5 retina GATTGTCAAA (2) 21.7 0.0217 P6.5 retina GATTGTCTTG (6) 10 0.01 P6.5 retina AGACCCTGTC (35) 6.7 0.0067 P6.5 retina CCTTTCTGCG (3) 3.3 0.0033 P6.5 retina TGGCTGCTGG (16) 3.3 0.0033 P6.5 retina CACAATCTCC (7) 1.7 0.0017 P6.5 retina GACAGTGGAG (9) 1.7 0.0017 P6.5 retina TTTCTCAAAA (4) 1.7 0.0017 P10.5 crx- retina GATTGTCTTG (6) 7.4 0.0074 P10.5 crx- retina TTTCTCAAAA (4) 5.6 0.0056 P10.5 crx- retina CACAATCTCC (7) 3.7 0.0037 P10.5 crx- retina CCTTTCTGCG (3) 3.7 0.0037 P10.5 crx- retina GACCGTGGAG (4) 3.7 0.0037 P10.5 crx- retina AGACCCTGTC (35) 1.9 0.0019 P10.5 crx- retina GACAGTGGAG (9) 1.9 0.0019 P10.5 crx- retina TGGCTGCTGG (16) 1.9 0.0019 P10.5 crx+ retina GATTGTCAAA (2) 17.3 0.0173 P10.5 crx+ retina AGACCCTGTC (35) 11.5 0.0115 P10.5 crx+ retina CCTTTCTGCG (3) 11.5 0.0115 P10.5 crx+ retina GATTGTCTTG (6) 11.5 0.0115 P10.5 crx+ retina ACACCTTTTA (4) 1.9 0.0019 P10.5 crx+ retina TTTCTCAAAA (4) 1.9 0.0019 Adult retinal AGACCCTGTC (35) 13 0.013 Adult retinal CCTTTCTGCG (3) 7.4 0.0074 Adult retinal GACAGTGGAG (9) 5.6 0.0056 Adult retinal GACCGTGGAG (4) 5.6 0.0056 Adult retinal TGGCTGCTGG (16) 5.6 0.0056 Adult retinal GATTGTCAAA (2) 3.7 0.0037 Adult retinal GATTGTCTTG (6) 3.7 0.0037 Adult retinal ACACTTTTAT (7) 1.9 0.0019 ONL AGACCCTGTC (35) 17.2 0.0172 ONL GATTGTCAAA (2) 9.6 0.0096 ONL GATTGTCTTG (6) 7.7 0.0077 ONL TGGCTGCTGG (16) 5.7 0.0057 ONL TTTCTCAAAA (4) 5.7 0.0057 ONL GGGGCTTATA (2) 1.9 0.0019