Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.286375	Emilin1	elastin microfibril interfacer 1	5		100952
Gene Ontology	cell adhesion | cytoplasm | extracellular matrix | extracellular matrix constituent conferring elasticity | extracellular space | phosphate transport | protein binding | protein self binding
Human Homolog	EMILIN1[elastin microfibril interfacer 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTAGCTCACA (30) 16.3 0.0163 Cb medulloblastoma GTAGCTCACA (30) 18.5 0.0185 P8 GC+1d culture GTAGCTCACA (30) 27.4 0.0274 P8 GC+1d culture CACACAACGC 1.1 0.0011 P8 GC+1d culture GGGCAGCTGG (12) 1.1 0.0011 P8 GC+SHH+1d culture GTAGCTCACA (30) 15.2 0.0152 P8 GC+SHH+1d culture GGGCAGCTGG (12) 3.5 0.0035 P8 GC+SHH+1d culture CACACAACGC 2.3 0.0023 P8 GC+SHH+1d culture AAGTACAGAA (3) 1.2 0.0012 P8 GC+SHH+1d culture ACCAGGTCGA (2) 1.2 0.0012 P8 GC+SHH+1d culture GGCCACCAGG 1.2 0.0012 3T3 fibroblasts GGGCAGCTGG (12) 21 0.021 3T3 fibroblasts GTAGCTCACA (30) 14 0.014 E15 cortex GTAGCTCACA (30) 29.7 0.0297 P1 cortex GTAGCTCACA (30) 13.6 0.0136 Hypothalamus GTAGCTCACA (30) 29 0.029 Hypothalamus AAGTACAGAA (3) 1.8 0.0018 Hypothalamus GGGCAGCTGG (12) 1.8 0.0018 E12.5 retina GTAGCTCACA (30) 30 0.03 E12.5 retina ATGGGGCTTT (13) 1.9 0.0019 E12.5 retina GGGCAGCTGG (12) 1.9 0.0019 E14.5 retina GTAGCTCACA (30) 31 0.031 E14.5 retina AAGTACAGAA (3) 1.8 0.0018 E14.5 retina GGCCACCAGG 1.8 0.0018 E16.5 retina GTAGCTCACA (30) 41.7 0.0417 E16.5 retina GGGCAGCTGG (12) 1.8 0.0018 E18.5 retina GTAGCTCACA (30) 16.4 0.0164 E18.5 retina ACCAGGTCGA (2) 1.8 0.0018 E18.5 retina ATGGGGCTTT (13) 1.8 0.0018 P0.5 retina GTAGCTCACA (30) 25.5 0.0255 P0.5 retina GGGCAGCTGG (12) 2 0.002 P2.5 retina GTAGCTCACA (30) 22.9 0.0229 P2.5 retina GGGCAGCTGG (12) 1.8 0.0018 P4.5 retina GTAGCTCACA (30) 25.8 0.0258 P4.5 retina AAGTACAGAA (3) 2 0.002 P4.5 retina GGGCAGCTGG (12) 2 0.002 P6.5 retina GTAGCTCACA (30) 18.3 0.0183 P6.5 retina GTCCCCAGAG (7) 3.3 0.0033 P6.5 retina GGGCAGCTGG (12) 1.7 0.0017 P10.5 crx- retina GTAGCTCACA (30) 16.7 0.0167 P10.5 crx- retina GGGCAGCTGG (12) 5.6 0.0056 P10.5 crx- retina ATGGGGCTTT (13) 1.9 0.0019 P10.5 crx+ retina GTAGCTCACA (30) 28.8 0.0288 P10.5 crx+ retina ATGGGGCTTT (13) 1.9 0.0019 Adult retinal GTAGCTCACA (30) 16.7 0.0167 Adult retinal GGGCAGCTGG (12) 7.4 0.0074 Adult retinal ATGGGGCTTT (13) 1.9 0.0019 Adult retinal GTCCCCAGAG (7) 1.9 0.0019 ONL GTAGCTCACA (30) 24.9 0.0249 ONL AAGTACAGAA (3) 1.9 0.0019 ONL GGCCACCAGG 1.9 0.0019 ONL GGGCAGCTGG (12) 1.9 0.0019