Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.286407 Sox9SRY-box containing gene 9 11  11 69.5 cM  20682 
 Gene Ontology cartilage condensation | cell differentiation | cell fate specification | DNA binding | heart development | male germ-line sex determination | male gonad development | nucleus | positive regulation of transcription from Pol II promoter | protein binding | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex
 Human Homolog SOX9[SRY (sex determining region Y)-box 9 (campomelic dysplasia, autosomal sex-reversal)]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 32 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCACAACATATT
GAGGACGATT
6.50.0065
Cb medulloblastomaGAGGACGATT
9.20.0092
P8 GC+1d cultureCCTCTGCAAG
GAGGACGATT
TTAACTCTGA (2)
5.60.0056
P8 GC+SHH+1d cultureCCTCTGCAAG
GAGGACGATT
TGCTAAAATT
TTAACTCTGA (2)
9.30.0093
3T3 fibroblastsCCTCTGCAAG
GAGGACGATT
140.014
E15 cortexGAGGACGATT
4.90.0049
P1 cortexGAGGACGATT
4.50.0045
E12.5 retinaACAACATATT
CCTCTGCAAG
TGCTAAAATT
5.70.0057
E14.5 retinaGAGGACGATT
TTAACTCTGA (2)
3.60.0036
E16.5 retinaACAACATATT
1.80.0018
E18.5 retinaACAACATATT
TACACCCCCA (2)
3.60.0036
P2.5 retinaGAGGACGATT
TACACCCCCA (2)
TGCTAAAATT
TTAACTCTGA (2)
14.10.0141
P4.5 retinaACAACATATT
GAGGACGATT
TTAACTCTGA (2)
9.90.0099
P10.5 crx- retinaTACACCCCCA (2)
TTAACTCTGA (2)
20.50.0205
P10.5 crx+ retinaTTAACTCTGA (2)
1.90.0019