Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.288451	Hnrpk	heterogeneous nuclear ribonucleoprotein K	13		15387
Gene Ontology	DNA binding | nucleic acid binding | nucleoplasm | nucleus | protein binding | ribonucleoprotein complex | RNA binding | RNA processing | viral nucleocapsid
Human Homolog	HNRPK[heterogeneous nuclear ribonucleoprotein K]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 183 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATATGTGAT AATCTGGAGC ATGTTAAAAA ATGTTAGTTA CAAAAACTAA CCCTCCCCCC GAAGTTTTAT GAGCCCATCA GGGGGAATTT TAAAGTTTGT TCCCTGGCAT 137 0.137 Cb medulloblastoma AATCTGGAGC ATGTAAAAAA (3) ATGTTAAAAA ATGTTAGTTA CAAAAACTAA CCCTCCCCCC GAAGTTTTAT GAGCCCATCA GGGGGAATTT TAAAGTTTGT TCCCTGGCAT 71.4 0.0714 P8 GC+1d culture AATATGTGAT AATCTGGAGC ATGTTAAAAA ATGTTAGTTA CAAAAACTAA CCCTCCCCCC GAGCCCATCA GGGGGAATTT GTGCCTACAA TAAAGTTTGT TCCCTGGCAT TTCCTGGCAT (2) 93.4 0.0934 P8 GC+SHH+1d culture AATATGTGAT AATCTGGAGC AGGGGAAGAG ATGTAAAAAA (3) ATGTCAAAAA ATGTTAAAAA ATGTTAGTTA CAAAAACTAA CCCTCCCCCC CTTATAATAA GAAGTTTTAT GGGGGAATTT TAAAGTTTGT TCCCTGGCAT 106.7 0.1067 3T3 fibroblasts CCCTCCCCCC GAGCCCATCA GGGGGAATTT TAAAGTTTGT TCCCTGGCAT TTCCTGGCAT (2) 49 0.049 E15 cortex CCCTCCCCCC CTTATAATAA GAAGTTTTAT GAGCCCATCA TAAAGTTTGT 39.4 0.0394 P1 cortex ATGTTAAAAA GAATTTTTAT (3) GGGGGAATTT 18.1 0.0181 Hypothalamus AATCTGGAGC ATGTTAAAAA ATGTTAGTTA CAAAAACTAA TAAAGTTTGT TCCCTGGCAT 27 0.027 E12.5 retina AATATGTGAT AATCTGGAGC AGGGGAAGAG ATGTTAAAAA ATGTTAGTTA CAAAAACTAA CCCTCCCCCC GAATTTTTAT (3) GGGGGAATTT GTGCCTACAA TAAAGTTTGT TCCCTGGCAT TTCCTGGCAT (2) 126 0.126 E14.5 retina ATGTTAAAAA ATGTTAGTTA CCCTCCCCCC CTTATAATAA GAAGTTTTAT GGGGGAATTT TAAAGTTTGT TCCCTGGCAT 67.4 0.0674 E16.5 retina AATATGTGAT ATGTTAAAAA ATGTTAGTTA CAAAAACTAA CCCTCCCCCC GAAGTTTTAT GAGCCCATCA GGGGGAATTT TAAAGTTTGT TCCCTGGCAT 68.8 0.0688 E18.5 retina AATCTGGAGC ATGTAAAAAA (3) ATGTTAAAAA ATGTTAGTTA CAAAAACTAA CCCTCCCCCC CTTATAATAA GAAGTTTTAT GGGGGAATTT TAAAGTTTGT TCCCTGGCAT 167.3 0.1673 P0.5 retina AATCTGGAGC ATGTTAAAAA ATGTTAGTTA CCCTCCCCCC GGGGGAATTT GTGCCTACAA TAAAGTTTGT TCCCCTGGCA (2) TCCCTGGCAT TTCCTGGCAT (2) 104.2 0.1042 P2.5 retina AATCTGGAGC ATGTTAAAAA ATGTTAGTTA CAAAAACTAA CCCTCCCCCC GGGGGAATTT TAAAGTTTGT TCCCCTGGCA (2) TCCCTGGCAT 125 0.125 P4.5 retina AATCTGGAGC ATGTAAAAAA (3) ATGTCAAAAA ATGTTAAAAA ATGTTAGTTA CAAAAACTAA CCCTCCCCCC GAAGTTTTAT GGGGGAATTT TAAAGTTTGT TCCCTGGCAT 107 0.107 P6.5 retina ATGTTAAAAA ATGTTAGTTA CAAAAACTAA CCCTCCCCCC CTTATAATAA GAAGTTTTAT GGGGGAATTT TAAAGTTTGT TCCCTGGCAT TTCCTGGCAT (2) 86.7 0.0867 P10.5 crx- retina ATGTTAGTTA CCCTCCCCCC GGGGGAATTT TCCCTGGCAT 29.9 0.0299 P10.5 crx+ retina AATATGTGAT AATCTGGAGC ATGTCAAAAA ATGTTAAAAA ATGTTAGTTA CAAAAACTAA CCCTCCCCCC GAAGTTTTAT GGGGGAATTT TAAAGTTTGT TCCCCTGGCA (2) TCCCTGGCAT 76.7 0.0767 Adult retinal AATATGTGAT ATGTCAAAAA ATGTTAAAAA ATGTTAGTTA CCCTCCCCCC GGGGGAATTT TCCCTGGCAT 28 0.028 ONL AATATGTGAT ATGTCAAAAA ATGTTAAAAA ATGTTAGTTA CAAAAACTAA CCCTCCCCCC GAAGTTTTAT GGGGGAATTT TCCCTGGCAT TTCCTGGCAT (2) 49.5 0.0495