Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.288733	2810442O16Rik	RIKEN cDNA 2810442O16 gene	2		67231
Gene Ontology	integral to membrane
Human Homolog	C20orf140[chromosome 20 open reading frame 140]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 148 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCTGCCCTG (8) 4.9 0.0049 P8 Cb GC CCCTTCCCTT (9) 4.9 0.0049 P8 Cb GC TGCAGAGGAA (5) 4.9 0.0049 P8 Cb GC GCTGGACAGC (9) 3.3 0.0033 P8 Cb GC AAAATAAACC (12) 1.6 0.0016 P8 Cb GC GCTGCCAGCA (5) 1.6 0.0016 P8 Cb GC TGACTCGTGA (3) 1.6 0.0016 Cb medulloblastoma TGCAGAGGAA (5) 16.2 0.0162 Cb medulloblastoma GCTGCCAGCA (5) 6.9 0.0069 Cb medulloblastoma CAGAGTGCTG (7) 4.6 0.0046 Cb medulloblastoma CCCTGCCCTG (8) 4.6 0.0046 Cb medulloblastoma CCCTTTCCTC (7) 2.3 0.0023 Cb medulloblastoma GCTGCCCAGC (6) 2.3 0.0023 Cb medulloblastoma TGACTCGTGA (3) 2.3 0.0023 P8 GC+1d culture CCCTTCCCTT (9) 14.8 0.0148 P8 GC+1d culture CCCTGCCCTG (8) 5.7 0.0057 P8 GC+1d culture TGCAGAGGAA (5) 4.6 0.0046 P8 GC+1d culture AGCTCAGGGT (2) 3.4 0.0034 P8 GC+1d culture TGACTCGTGA (3) 3.4 0.0034 P8 GC+1d culture GCTGGACAGC (9) 2.3 0.0023 P8 GC+1d culture CCCTTCCCCC (3) 1.1 0.0011 P8 GC+1d culture GAAGCAAAAG 1.1 0.0011 P8 GC+1d culture GCAGGAGGAT (2) 1.1 0.0011 P8 GC+1d culture GCTGCCCAGC (6) 1.1 0.0011 P8 GC+SHH+1d culture CCCTTCCCTT (9) 17.6 0.0176 P8 GC+SHH+1d culture CAGAGTGCTG (7) 7 0.007 P8 GC+SHH+1d culture GCTGCCAGCA (5) 5.9 0.0059 P8 GC+SHH+1d culture TGACTCGTGA (3) 5.9 0.0059 P8 GC+SHH+1d culture AGCTCAGGGT (2) 2.3 0.0023 P8 GC+SHH+1d culture CCCTGCCCTG (8) 2.3 0.0023 P8 GC+SHH+1d culture GTTGCTGCGG 1.2 0.0012 P8 GC+SHH+1d culture TGCAGAGGAA (5) 1.2 0.0012 3T3 fibroblasts CCCTGCCCTG (8) 17.5 0.0175 3T3 fibroblasts AGCTCAGGGT (2) 7 0.007 3T3 fibroblasts CCCTTCCCTT (9) 3.5 0.0035 E15 cortex CCCTTCCCTT (9) 24.7 0.0247 E15 cortex AGCTCAGGGT (2) 9.9 0.0099 E15 cortex GCTGCCAGCA (5) 9.9 0.0099 E15 cortex CCCTGCCCTG (8) 4.9 0.0049 P1 cortex CCCTTCCCTT (9) 18.2 0.0182 Hypothalamus GCTGCCAGCA (5) 18.1 0.0181 Hypothalamus CCCTTCCCTT (9) 5.4 0.0054 Hypothalamus TGCAGAGGAA (5) 5.4 0.0054 Hypothalamus AGCTCAGGGT (2) 1.8 0.0018 Hypothalamus CCCTGCCCTG (8) 1.8 0.0018 Hypothalamus GAAGCAAAAG 1.8 0.0018 E12.5 retina CCCTTCCCTT (9) 16.9 0.0169 E12.5 retina CAGAGTGCTG (7) 5.6 0.0056 E12.5 retina CCCTGCCCTG (8) 3.8 0.0038 E12.5 retina GCTGCCCAGC (6) 3.8 0.0038 E12.5 retina AAAATAAACC (12) 1.9 0.0019 E12.5 retina GCAGGAGGAT (2) 1.9 0.0019 E12.5 retina TGACTCGTGA (3) 1.9 0.0019 E12.5 retina TGCAGAGGAA (5) 1.9 0.0019 E14.5 retina GCTGCCAGCA (5) 27.3 0.0273 E14.5 retina GTGGATGATT 20 0.02 E14.5 retina CCCTTCCCTT (9) 10.9 0.0109 E14.5 retina ACAAAACCTA (3) 3.6 0.0036 E14.5 retina CCCTGCCCTG (8) 3.6 0.0036 E14.5 retina ACCTTCCCTC (3) 1.8 0.0018 E14.5 retina AGCTCAGGGT (2) 1.8 0.0018 E14.5 retina CCCTTCCCCC (3) 1.8 0.0018 E14.5 retina GAAGCAAAAG 1.8 0.0018 E14.5 retina GCAGGAGGAT (2) 1.8 0.0018 E14.5 retina GCTGCCCAGC (6) 1.8 0.0018 E14.5 retina GGCTTCCCTC (6) 1.8 0.0018 E14.5 retina GTTGCTGCGG 1.8 0.0018 E14.5 retina TGACTCGTGA (3) 1.8 0.0018 E16.5 retina CCCTTCCCTT (9) 41.7 0.0417 E16.5 retina GCTGCCAGCA (5) 27.2 0.0272 E16.5 retina CCCTTCCCTC (3) 3.6 0.0036 E16.5 retina AGCTCAGGGT (2) 1.8 0.0018 E16.5 retina CAGAGTTGCT (3) 1.8 0.0018 E16.5 retina TGACTCGTGA (3) 1.8 0.0018 E16.5 retina TGCAGAGGAA (5) 1.8 0.0018 E18.5 retina GCTGCCAGCA (5) 18.2 0.0182 E18.5 retina CCCTTCCCTT (9) 9.1 0.0091 E18.5 retina GTGGATGATT 3.6 0.0036 E18.5 retina AAAATAAACC (12) 1.8 0.0018 E18.5 retina AGCTCAGGGT (2) 1.8 0.0018 E18.5 retina CCCTGCCCTG (8) 1.8 0.0018 E18.5 retina CCCTTCCCTC (3) 1.8 0.0018 E18.5 retina TGCAGAGGAA (5) 1.8 0.0018 P0.5 retina CCCTTCCCTT (9) 37.3 0.0373 P0.5 retina CCCTGCCCTG (8) 5.9 0.0059 P0.5 retina TGCAGAGGAA (5) 5.9 0.0059 P0.5 retina CAGAGTGCTG (7) 3.9 0.0039 P0.5 retina TAACTGTGCC (5) 3.9 0.0039 P0.5 retina AGCTCAGGGT (2) 2 0.002 P0.5 retina GAAGCAAAAG 2 0.002 P0.5 retina GCTGCCAGCA (5) 2 0.002 P0.5 retina GCTGGACAGC (9) 2 0.002 P2.5 retina CCCTTCCCTT (9) 17.6 0.0176 P2.5 retina AGCTCAGGGT (2) 3.5 0.0035 P2.5 retina CAGAGTGCTG (7) 3.5 0.0035 P2.5 retina CCCTGCCCTG (8) 3.5 0.0035 P2.5 retina GCTGCCAGCA (5) 3.5 0.0035 P2.5 retina TGACTCGTGA (3) 3.5 0.0035 P2.5 retina CCCTTCCCCC (3) 1.8 0.0018 P2.5 retina CCCTTTCCTC (7) 1.8 0.0018 P2.5 retina GCAGGAGGAT (2) 1.8 0.0018 P2.5 retina GCTGCCCAGC (6) 1.8 0.0018 P2.5 retina TGCAGAGGAA (5) 1.8 0.0018 P4.5 retina CCCTTCCCTT (9) 5.9 0.0059 P4.5 retina TGACTCGTGA (3) 5.9 0.0059 P4.5 retina TGCAGAGGAA (5) 5.9 0.0059 P4.5 retina CCCTGCCCTG (8) 4 0.004 P4.5 retina GCTGCCAGCA (5) 4 0.004 P4.5 retina ACCTTCCCTC (3) 2 0.002 P4.5 retina CCCTTTCCTC (7) 2 0.002 P4.5 retina GGCTTCCCTC (6) 2 0.002 P4.5 retina TAACTGTGCC (5) 2 0.002 P6.5 retina CCCTGCCCTG (8) 15 0.015 P6.5 retina CCCTTCCCTT (9) 15 0.015 P6.5 retina TGCAGAGGAA (5) 5 0.005 P6.5 retina AGCTCAGGGT (2) 3.3 0.0033 P6.5 retina GCTGCCAGCA (5) 3.3 0.0033 P6.5 retina ACCTTCCCTC (3) 1.7 0.0017 P6.5 retina CAGAGTGCTG (7) 1.7 0.0017 P6.5 retina GAAGCAAAAG 1.7 0.0017 P6.5 retina TGACTCGTGA (3) 1.7 0.0017 P10.5 crx- retina GCTGCCAGCA (5) 31.6 0.0316 P10.5 crx- retina CCCTGCCCTG (8) 9.3 0.0093 P10.5 crx- retina CCCTTCCCTT (9) 3.7 0.0037 P10.5 crx- retina AGCTCAGGGT (2) 1.9 0.0019 P10.5 crx- retina CAGAGTTGCT (3) 1.9 0.0019 P10.5 crx- retina TGCAGAGGAA (5) 1.9 0.0019 P10.5 crx+ retina CCCTGCCCTG (8) 13.5 0.0135 P10.5 crx+ retina TGCAGAGGAA (5) 7.7 0.0077 P10.5 crx+ retina CAGAGTGCTG (7) 5.8 0.0058 P10.5 crx+ retina CCCTTCCCTT (9) 3.8 0.0038 P10.5 crx+ retina GCTGCCCAGC (6) 3.8 0.0038 P10.5 crx+ retina AGCTCAGGGT (2) 1.9 0.0019 P10.5 crx+ retina CAGAGTTGCT (3) 1.9 0.0019 P10.5 crx+ retina GAAGCAAAAG 1.9 0.0019 P10.5 crx+ retina GCTGCCAGCA (5) 1.9 0.0019 Adult retinal CCCTGCCCTG (8) 9.3 0.0093 Adult retinal CCCTTCCCTT (9) 5.6 0.0056 Adult retinal TGCAGAGGAA (5) 5.6 0.0056 Adult retinal AGCTCAGGGT (2) 3.7 0.0037 Adult retinal CCCTTCCCTC (3) 3.7 0.0037 Adult retinal GGCTTCCCTC (6) 1.9 0.0019 Adult retinal GTTGCTGCGG 1.9 0.0019 Adult retinal TGACTCGTGA (3) 1.9 0.0019 ONL CCCTGCCCTG (8) 5.7 0.0057 ONL GTGGATGATT 5.7 0.0057 ONL CAGAGTGCTG (7) 1.9 0.0019 ONL TGCAGAGGAA (5) 1.9 0.0019