Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28893
E030024I16Rik
RIKEN cDNA E030024I16 gene
3
320888
Mm.28893
Rap1gds1
RAP1, GTP-GDP dissociation stimulator 1
3
3 H1
229877
Mm.28893
A130064L14Rik
RIKEN cDNA A130064L14 gene
3
320257
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 5 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 23 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAAGTGAAAA
(
4
)
3.3
0.0033
Cb medulloblastoma
ACTGACAGTT
(
3
)
TAAGTAAAAA
(
3
)
TAAGTGAAAA
(
4
)
18.4
0.0184
P8 GC+1d culture
TAAGTGAAAA
(
4
)
TTTCAGCACT
(
4
)
3.4
0.0034
P8 GC+SHH+1d culture
ACTGACAGTT
(
3
)
TAAGTGAAAA
(
4
)
4.7
0.0047
E15 cortex
TAAGTGAAAA
(
4
)
4.9
0.0049
Hypothalamus
TAAGTGAAAA
(
4
)
25.4
0.0254
E12.5 retina
TTTCAGCACT
(
4
)
1.9
0.0019
E14.5 retina
TAAGTGAAAA
(
4
)
1.8
0.0018
E16.5 retina
TAAGTGAAAA
(
4
)
TTTCAGCACT
(
4
)
3.6
0.0036
P0.5 retina
ACTGACAGTT
(
3
)
TAAGTGAAAA
(
4
)
4
0.004
P2.5 retina
TAAGTGAAAA
(
4
)
3.5
0.0035
P4.5 retina
TAAGTGAAAA
(
4
)
2
0.002
P6.5 retina
ACTGACAGTT
(
3
)
1.7
0.0017
P10.5 crx- retina
TAAGTGAAAA
(
4
)
13
0.013
P10.5 crx+ retina
TAAGTGAAAA
(
4
)
7.7
0.0077
Adult retinal
TAAGTGAAAA
(
4
)
5.6
0.0056
ONL
TAAGTGAAAA
(
4
)
1.9
0.0019
