Mouse Retina SAGE Library
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Gene: 
Accession: 
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag: 
Cytoband (Mm): 
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene: 
Cytoband (Hs): 
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28893
E030024I16Rik
RIKEN cDNA E030024I16 gene
3
320888
Mm.28893
Rap1gds1
RAP1, GTP-GDP dissociation stimulator 1
3
3 H1
229877
Mm.28893
A130064L14Rik
RIKEN cDNA A130064L14 gene
3
320257
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 5 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 68 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAAGTGAAAA
(
4
)
3.3
0.0033
P8 Cb GC
AAAACAAAAA (
22
)
1.6
0.0016
Cb medulloblastoma
TAAGTGAAAA
(
4
)
9.2
0.0092
Cb medulloblastoma
TAAGTAAAAA
(
4
)
6.9
0.0069
Cb medulloblastoma
AAAACAAAAA (
22
)
2.3
0.0023
Cb medulloblastoma
AAATAAATCT (
5
)
2.3
0.0023
Cb medulloblastoma
ACTGACAGTT
(
3
)
2.3
0.0023
P8 GC+1d culture
CTGTAGATGC (
5
)
4.6
0.0046
P8 GC+1d culture
AAAACAAAAA (
22
)
3.4
0.0034
P8 GC+1d culture
TAAGTGAAAA
(
4
)
2.3
0.0023
P8 GC+1d culture
AAATAAATCT (
5
)
1.1
0.0011
P8 GC+1d culture
ACACTGGCTT (
8
)
1.1
0.0011
P8 GC+1d culture
TTTCAGCACT
(
6
)
1.1
0.0011
P8 GC+SHH+1d culture
AAATAAATCT (
5
)
3.5
0.0035
P8 GC+SHH+1d culture
TAAGTGAAAA
(
4
)
3.5
0.0035
P8 GC+SHH+1d culture
AAAACAAAAA (
22
)
2.3
0.0023
P8 GC+SHH+1d culture
ACTGACAGTT
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
AGAACAAAAG (
7
)
1.2
0.0012
P8 GC+SHH+1d culture
CTGTAGATGC (
5
)
1.2
0.0012
P8 GC+SHH+1d culture
GCCAAAACTT (
4
)
1.2
0.0012
3T3 fibroblasts
CTGTAGATGC (
5
)
3.5
0.0035
E15 cortex
TAAGTGAAAA
(
4
)
4.9
0.0049
Hypothalamus
TAAGTGAAAA
(
4
)
25.4
0.0254
Hypothalamus
AAAACAAAAA (
22
)
1.8
0.0018
Hypothalamus
CTGTAGATGC (
5
)
1.8
0.0018
E12.5 retina
ACACTGGCTT (
8
)
1.9
0.0019
E12.5 retina
CTGTAGATGC (
5
)
1.9
0.0019
E12.5 retina
TTTCAGCACT
(
6
)
1.9
0.0019
E14.5 retina
AAATAAATCT (
5
)
1.8
0.0018
E14.5 retina
AGAACAAAAG (
7
)
1.8
0.0018
E14.5 retina
CTGTAGATGC (
5
)
1.8
0.0018
E14.5 retina
TAAGTGAAAA
(
4
)
1.8
0.0018
E16.5 retina
AAATAAATCT (
5
)
1.8
0.0018
E16.5 retina
TAAGTGAAAA
(
4
)
1.8
0.0018
E16.5 retina
TTTCAGCACT
(
6
)
1.8
0.0018
E18.5 retina
AAATAAATCT (
5
)
1.8
0.0018
P0.5 retina
CTGTAGATGC (
5
)
3.9
0.0039
P0.5 retina
ACACTGGCTT (
8
)
2
0.002
P0.5 retina
ACTGACAGTT
(
3
)
2
0.002
P0.5 retina
TAAGTGAAAA
(
4
)
2
0.002
P2.5 retina
TAAGTGAAAA
(
4
)
3.5
0.0035
P2.5 retina
AAATAAATCT (
5
)
1.8
0.0018
P2.5 retina
CTGTAGATGC (
5
)
1.8
0.0018
P4.5 retina
AAATAAATCT (
5
)
5.9
0.0059
P4.5 retina
CTGTAGATGC (
5
)
4
0.004
P4.5 retina
ACACTGGCTT (
8
)
2
0.002
P4.5 retina
TAAGTGAAAA
(
4
)
2
0.002
P6.5 retina
AAATAAATCT (
5
)
3.3
0.0033
P6.5 retina
AAAACAAAAA (
22
)
1.7
0.0017
P6.5 retina
ACACTGGCTT (
8
)
1.7
0.0017
P6.5 retina
ACTGACAGTT
(
3
)
1.7
0.0017
P6.5 retina
AGAACAAAAG (
7
)
1.7
0.0017
P10.5 crx- retina
TAAGTGAAAA
(
4
)
13
0.013
P10.5 crx- retina
AAAACAAAAA (
22
)
1.9
0.0019
P10.5 crx- retina
ACACTGGCTT (
8
)
1.9
0.0019
P10.5 crx- retina
AGAACAAAAG (
7
)
1.9
0.0019
P10.5 crx- retina
GCCAAAACTT (
4
)
1.9
0.0019
P10.5 crx+ retina
TAAGTGAAAA
(
4
)
7.7
0.0077
Adult retinal
TAAGTGAAAA
(
4
)
5.6
0.0056
Adult retinal
CTGTAGATGC (
5
)
3.7
0.0037
Adult retinal
AAAACAAAAA (
22
)
1.9
0.0019
Adult retinal
ACACTGGCTT (
8
)
1.9
0.0019
Adult retinal
GCCAAAACTT (
4
)
1.9
0.0019
ONL
AAAACAAAAA (
22
)
7.7
0.0077
ONL
AAATAAATCT (
5
)
1.9
0.0019
ONL
ACACTGGCTT (
8
)
1.9
0.0019
ONL
CTGTAGATGC (
5
)
1.9
0.0019
ONL
TAAGTGAAAA
(
4
)
1.9
0.0019