Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.289106	Add1	adducin 1 (alpha)	5	5 20.0 cM	11518
Gene Ontology	calmodulin binding | cytoskeleton | membrane | structural molecule activity
Human Homolog	ADD1[adducin 1 (alpha)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 92 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTCTCCAGC (7) 57.1 0.0571 P8 Cb GC AAATATCGTT (3) 4.9 0.0049 P8 Cb GC AGAGCAGAAA (2) 1.6 0.0016 P8 Cb GC GGGCACCAAG (4) 1.6 0.0016 P8 Cb GC TGTAATACAA (2) 1.6 0.0016 P8 Cb GC TTCCTCTCCC (3) 1.6 0.0016 Cb medulloblastoma GCTCTCCAGC (7) 161.9 0.1619 Cb medulloblastoma TTGAAATCAA (3) 11.6 0.0116 Cb medulloblastoma AAATATCGTT (3) 6.9 0.0069 Cb medulloblastoma GAGGCTCTGC (3) 6.9 0.0069 Cb medulloblastoma GACCCTGGCA (3) 2.3 0.0023 Cb medulloblastoma GGGCACCAAG (4) 2.3 0.0023 Cb medulloblastoma TGTAATACAA (2) 2.3 0.0023 Cb medulloblastoma TTCCTCTCCC (3) 2.3 0.0023 P8 GC+1d culture GCTCTCCAGC (7) 69.6 0.0696 P8 GC+1d culture AAATATCGTT (3) 12.6 0.0126 P8 GC+1d culture GAGGCTCTGC (3) 4.6 0.0046 P8 GC+1d culture GGGCACCAAG (4) 1.1 0.0011 P8 GC+1d culture TTCCTCTCCC (3) 1.1 0.0011 P8 GC+SHH+1d culture GCTCTCCAGC (7) 74.9 0.0749 P8 GC+SHH+1d culture AAATATCGTT (3) 10.5 0.0105 P8 GC+SHH+1d culture GAGGCTCTGC (3) 2.3 0.0023 P8 GC+SHH+1d culture GGGCACCAAG (4) 1.2 0.0012 3T3 fibroblasts GCTCTCCAGC (7) 28 0.028 3T3 fibroblasts GAGGCTCTGC (3) 21 0.021 3T3 fibroblasts AAATATCGTT (3) 3.5 0.0035 3T3 fibroblasts AGAGCAGAAA (2) 3.5 0.0035 3T3 fibroblasts GACCCTGGCA (3) 3.5 0.0035 E15 cortex GCTCTCCAGC (7) 69.3 0.0693 E15 cortex AGAGCAGAAA (2) 4.9 0.0049 E15 cortex CAGCCCTGGG (12) 4.9 0.0049 E15 cortex GACCCTGGCA (3) 4.9 0.0049 P1 cortex GCTCTCCAGC (7) 54.5 0.0545 P1 cortex AAATATCGTT (3) 22.7 0.0227 P1 cortex GAGGCTCTGC (3) 4.5 0.0045 Hypothalamus GCTCTCCAGC (7) 77.9 0.0779 Hypothalamus TGTAATACAA (2) 10.9 0.0109 Hypothalamus AAATATCGTT (3) 7.2 0.0072 Hypothalamus TTCCTCTCCC (3) 3.6 0.0036 Hypothalamus GAGGCTCTGC (3) 1.8 0.0018 Hypothalamus GGAGGATCAC 1.8 0.0018 Hypothalamus GGGCACCAAG (4) 1.8 0.0018 Hypothalamus TTGAAATCAA (3) 1.8 0.0018 E12.5 retina GCTCTCCAGC (7) 50.7 0.0507 E12.5 retina AAATATCGTT (3) 15 0.015 E12.5 retina GAGGCTCTGC (3) 1.9 0.0019 E12.5 retina TTCCTCTCCC (3) 1.9 0.0019 E14.5 retina GCTCTCCAGC (7) 72.9 0.0729 E14.5 retina AAATATCGTT (3) 7.3 0.0073 E14.5 retina TTCCTCTCCC (3) 1.8 0.0018 E16.5 retina GCTCTCCAGC (7) 97.8 0.0978 E16.5 retina AAATATCGTT (3) 5.4 0.0054 E18.5 retina GCTCTCCAGC (7) 125.5 0.1255 E18.5 retina TTGAAATCAA (3) 10.9 0.0109 E18.5 retina AAATATCGTT (3) 3.6 0.0036 E18.5 retina TGTAATACAA (2) 1.8 0.0018 E18.5 retina TTCCTCTCCC (3) 1.8 0.0018 P0.5 retina GCTCTCCAGC (7) 66.7 0.0667 P0.5 retina AAATATCGTT (3) 7.9 0.0079 P0.5 retina GAGGCTCTGC (3) 3.9 0.0039 P0.5 retina AGAGCAGAAA (2) 2 0.002 P2.5 retina GCTCTCCAGC (7) 75.7 0.0757 P2.5 retina AAATATCGTT (3) 10.6 0.0106 P2.5 retina CAGCCCTGGG (12) 1.8 0.0018 P2.5 retina GAGGCTCTGC (3) 1.8 0.0018 P2.5 retina TGTAATACAA (2) 1.8 0.0018 P2.5 retina TTCCTCTCCC (3) 1.8 0.0018 P4.5 retina GCTCTCCAGC (7) 65.4 0.0654 P4.5 retina AAATATCGTT (3) 5.9 0.0059 P6.5 retina GCTCTCCAGC (7) 81.7 0.0817 P6.5 retina AAATATCGTT (3) 13.3 0.0133 P6.5 retina GAGGCTCTGC (3) 6.7 0.0067 P6.5 retina GGGCACCAAG (4) 1.7 0.0017 P6.5 retina TGTAATACAA (2) 1.7 0.0017 P10.5 crx- retina GCTCTCCAGC (7) 55.7 0.0557 P10.5 crx- retina AAATATCGTT (3) 18.6 0.0186 P10.5 crx- retina CAGCCCTGGG (12) 1.9 0.0019 P10.5 crx- retina GAGGCTCTGC (3) 1.9 0.0019 P10.5 crx+ retina GCTCTCCAGC (7) 94.2 0.0942 P10.5 crx+ retina AAATATCGTT (3) 11.5 0.0115 P10.5 crx+ retina GGAGGATCAC 3.8 0.0038 P10.5 crx+ retina GAGGCTCTGC (3) 1.9 0.0019 Adult retinal GCTCTCCAGC (7) 57.4 0.0574 Adult retinal AAATATCGTT (3) 7.4 0.0074 Adult retinal TTCCTCTCCC (3) 7.4 0.0074 Adult retinal GAGGCTCTGC (3) 3.7 0.0037 Adult retinal TGTAATACAA (2) 3.7 0.0037 ONL GCTCTCCAGC (7) 28.7 0.0287 ONL AAATATCGTT (3) 7.7 0.0077 ONL TTCCTCTCCC (3) 3.8 0.0038 ONL GGAGGATCAC 1.9 0.0019 ONL TGTAATACAA (2) 1.9 0.0019