Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.289490 Nr1d1nuclear receptor subfamily 1, group D, member 1 11    217166 
 Gene Ontology circadian rhythm | DNA binding | nucleus | receptor activity | regulation of transcription, DNA-dependent | transcription factor activity
 Human Homolog NR1D1[nuclear receptor subfamily 1, group D, member 1]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 61 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCTCTGTAGCCC (2)
29.40.0294
Cb medulloblastomaCTCCCATCCT (4)
GACACCGTCC
TCTGTAGCCC (2)
670.067
P8 GC+1d cultureCATTCCGAGA (2)
CCACTCGTGG
CTCCCATCCT (4)
GACACCGTCC
GCGGTGGGGG
TCTGTAGCCC (2)
50.10.0501
P8 GC+SHH+1d cultureCCACTCGTGG
CTCCCATCCT (4)
GCGGTGGGGG
GTGCTACTGT (2)
TCTGTAGCCC (2)
36.40.0364
3T3 fibroblastsCCACTCGTGG
CTCCCATCCT (4)
TCTGTAGCCC (2)
17.50.0175
E15 cortexGACACCGTCC
GCGGTGGGGG
TCTGTAGCCC (2)
74.20.0742
P1 cortexCCACTCGTGG
GACACCGTCC
TCTGTAGCCC (2)
113.50.1135
HypothalamusCATTCCGAGA (2)
CCACTCGTGG
CTCCCATCCT (4)
GACACCGTCC
GTGCTACTGT (2)
TCTGTAGCCC (2)
57.90.0579
E12.5 retinaTCTGTAGCCC (2)
13.10.0131
E14.5 retinaTCTGTAGCCC (2)
23.70.0237
E16.5 retinaTCTGTAGCCC (2)
56.10.0561
E18.5 retinaTCTGTAGCCC (2)
400.04
P0.5 retinaGACACCGTCC
GCGGTGGGGG
TCTGTAGCCC (2)
530.053
P2.5 retinaCATTCCGAGA (2)
GCGGTGGGGG
GTGCTACTGT (2)
TCTGTAGCCC (2)
61.70.0617
P4.5 retinaCTCCCATCCT (4)
GCGGTGGGGG
GTGCTACTGT (2)
TCTGTAGCCC (2)
61.50.0615
P6.5 retinaCATTCCGAGA (2)
GCGGTGGGGG
GTGCTACTGT (2)
TCTGTAGCCC (2)
93.30.0933
P10.5 crx- retinaCATTCCGAGA (2)
CCACTCGTGG
CTCCCATCCT (4)
GCGGTGGGGG
TCTGTAGCCC (2)
104.10.1041
P10.5 crx+ retinaCTCCCATCCT (4)
TCTGTAGCCC (2)
65.30.0653
Adult retinalCATTCCGAGA (2)
CTCCCATCCT (4)
GCGGTGGGGG
TCTGTAGCCC (2)
37.20.0372
ONLTCTGTAGCCC (2)
11.50.0115