Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.289584	Bmi1	B lymphoma Mo-MLV insertion region 1	2	2 9.0 cM	12151
Gene Ontology	brain development | cell growth and/or maintenance | chromatin modification | humoral immune response | nuclear body | nucleus | protein binding | protein binding | protein ubiquitination | regulation of transcription, DNA-dependent | skeletal development | somatic stem cell renewal | ubiquitin ligase complex | ubiquitin-protein ligase activity | zinc ion binding
Human Homolog	BMI1[B lymphoma Mo-MLV insertion region (mouse)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 87 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAACCTCAG AAACAATATT (2) AATGGAACAG GCTGTTAACT TTGAATTAAA (2) TTTGTATGGG 14.6 0.0146 Cb medulloblastoma CATTCAAAAA (2) TTGAATTAAA (2) 9.2 0.0092 P8 GC+1d culture AAACAATATT (2) AATGGAACAG GCTGTTAACT GTGTTACCTA TTGAATTAAA (2) TTTGTATGGG 18.1 0.0181 P8 GC+SHH+1d culture AATGGAACAG CATTCAAAAA (2) GCTGTTAACT TTGAATTAAA (2) TTTGTATGGG 14 0.014 3T3 fibroblasts GTCATAGCTG (2) GTGTTACCTA 17.5 0.0175 E15 cortex GTCATAGCTG (2) GTGTTACCTA 9.8 0.0098 P1 cortex CATTCAAAAA (2) 4.5 0.0045 Hypothalamus GCTGTTAACT TTGAATTAAA (2) 12.7 0.0127 E12.5 retina TTGAATTAAA (2) 3.8 0.0038 E14.5 retina AAACAATATT (2) CATTCAAAAA (2) GCTGTTAACT TTGAATTAAA (2) TTTGTATGGG 16.4 0.0164 E16.5 retina AATGGAACAG GCTGTTAACT TTGAATTAAA (2) TTTGTATGGG 10.8 0.0108 E18.5 retina CATTCAAAAA (2) GCTGTTAACT GTGTTACCTA TTGAATTAAA (2) TTTGTATGGG 25.4 0.0254 P0.5 retina CATTCAAAAA (2) GTCATAGCTG (2) GTGTTACCTA TTGAATTAAA (2) TTTGTATGGG 19.7 0.0197 P2.5 retina AATGGAACAG CATTCAAAAA (2) GTCATAGCTG (2) GTGTTACCTA TTGAATTAAA (2) TTTGTATGGG 30 0.03 P4.5 retina AAAACCTCAG CATTCAAAAA (2) GCTGTTAACT GTCATAGCTG (2) TTGAATTAAA (2) TTTGTATGGG 39.7 0.0397 P6.5 retina AAAACCTCAG CATTCAAAAA (2) GCTGTTAACT GTCATAGCTG (2) TTGAATTAAA (2) 41.7 0.0417 P10.5 crx- retina AATGGAACAG GCTGTTAACT GTGTTACCTA TTGAATTAAA (2) TTTGTATGGG 16.8 0.0168 P10.5 crx+ retina AAAACCTCAG AATGGAACAG CATTCAAAAA (2) GCTGTTAACT GTGTTACCTA TTGAATTAAA (2) 15.3 0.0153 Adult retinal AATGGAACAG GCTGTTAACT GTCATAGCTG (2) TTGAATTAAA (2) TTTGTATGGG 18.7 0.0187 ONL AAAACCTCAG AAACAATATT (2) AATGGAACAG GCTGTTAACT GTCATAGCTG (2) GTGTTACCTA TTGAATTAAA (2) TTTGTATGGG 32.3 0.0323