Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.289627
Atxn7l3
ataxin 7-like 3
11
217218
Human Homolog
ATXN7L3[ataxin 7-like 3]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 64 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCTGCTGGTG
(
9
)
13.1
0.0131
P8 Cb GC
GGCTCCTTGG (
6
)
8.2
0.0082
P8 Cb GC
CTGGGGTCAT (
3
)
1.6
0.0016
Cb medulloblastoma
GCTGCTGGTG
(
9
)
23.1
0.0231
Cb medulloblastoma
GGCTCCTTGG (
6
)
4.6
0.0046
Cb medulloblastoma
GGCTGCCTGG
(
14
)
2.3
0.0023
P8 GC+1d culture
GCTGCTGGTG
(
9
)
16
0.016
P8 GC+1d culture
GGCTCCTTGG (
6
)
3.4
0.0034
P8 GC+1d culture
GGCTGCCTGG
(
14
)
1.1
0.0011
P8 GC+1d culture
TGTCTGTGTG
(
8
)
1.1
0.0011
P8 GC+SHH+1d culture
GCTGCTGGTG
(
9
)
8.2
0.0082
P8 GC+SHH+1d culture
GGCTCCTTGG (
6
)
3.5
0.0035
P8 GC+SHH+1d culture
TAAAACTGTA (
6
)
1.2
0.0012
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
3T3 fibroblasts
GCTGCTGGTG
(
9
)
3.5
0.0035
E15 cortex
GCTGCTGGTG
(
9
)
14.8
0.0148
E15 cortex
CTGGGGTCAT (
3
)
4.9
0.0049
E15 cortex
GGCTCCTTGG (
6
)
4.9
0.0049
E15 cortex
GGCTGCCTGG
(
14
)
4.9
0.0049
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
P1 cortex
GCTGCTGGTG
(
9
)
13.6
0.0136
Hypothalamus
GCTGCTGGTG
(
9
)
18.1
0.0181
Hypothalamus
CTGGGGTCAT (
3
)
3.6
0.0036
Hypothalamus
GGCTGCCTGG
(
14
)
1.8
0.0018
Hypothalamus
TGTCTGTGTG
(
8
)
1.8
0.0018
E12.5 retina
GCTGCTGGTG
(
9
)
5.6
0.0056
E12.5 retina
GGCTCCTTGG (
6
)
3.8
0.0038
E14.5 retina
GCTGCTGGTG
(
9
)
14.6
0.0146
E14.5 retina
GGCTCCTTGG (
6
)
1.8
0.0018
E14.5 retina
TGTCTGTGTG
(
8
)
1.8
0.0018
E16.5 retina
GCTGCTGGTG
(
9
)
12.7
0.0127
E18.5 retina
GCTGCTGGTG
(
9
)
34.6
0.0346
E18.5 retina
CTGGGGTCAT (
3
)
1.8
0.0018
E18.5 retina
GGCTCCTTGG (
6
)
1.8
0.0018
P0.5 retina
GCTGCTGGTG
(
9
)
5.9
0.0059
P0.5 retina
GGCTGCCTGG
(
14
)
3.9
0.0039
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
GGCTCCTTGG (
6
)
2
0.002
P2.5 retina
GCTGCTGGTG
(
9
)
17.6
0.0176
P2.5 retina
GGCTCCTTGG (
6
)
5.3
0.0053
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P2.5 retina
TAAAACTGTA (
6
)
1.8
0.0018
P2.5 retina
TGTCTGTGTG
(
8
)
1.8
0.0018
P4.5 retina
GCTGCTGGTG
(
9
)
19.8
0.0198
P4.5 retina
GGCTCCTTGG (
6
)
4
0.004
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P6.5 retina
GCTGCTGGTG
(
9
)
15
0.015
P6.5 retina
GGCTCCTTGG (
6
)
5
0.005
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P6.5 retina
TGTCTGTGTG
(
8
)
1.7
0.0017
P10.5 crx- retina
GGCTCCTTGG (
6
)
9.3
0.0093
P10.5 crx- retina
GCTGCTGGTG
(
9
)
3.7
0.0037
P10.5 crx- retina
TGTCTGTGTG
(
8
)
1.9
0.0019
P10.5 crx+ retina
GCTGCTGGTG
(
9
)
28.8
0.0288
P10.5 crx+ retina
GGCTCCTTGG (
6
)
5.8
0.0058
P10.5 crx+ retina
GGCTGCCTGG
(
14
)
1.9
0.0019
Adult retinal
GCTGCTGGTG
(
9
)
11.1
0.0111
Adult retinal
GGCTCCTTGG (
6
)
1.9
0.0019
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
Adult retinal
TGTCTGTGTG
(
8
)
1.9
0.0019
ONL
GCTGCTGGTG
(
9
)
13.4
0.0134
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
GGCTCCTTGG (
6
)
1.9
0.0019
ONL
GGCTGCCTGG
(
14
)
1.9
0.0019
