Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.289627
Atxn7l3
ataxin 7-like 3
11
217218
Human Homolog
ATXN7L3[ataxin 7-like 3]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 34 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCTGCTGGTG
(
3
)
13.1
0.0131
Cb medulloblastoma
GCTGCTGGTG
(
3
)
23.1
0.0231
Cb medulloblastoma
GGCTGCCTGG
(
2
)
2.3
0.0023
P8 GC+1d culture
GCTGCTGGTG
(
3
)
16
0.016
P8 GC+1d culture
GGCTGCCTGG
(
2
)
1.1
0.0011
P8 GC+1d culture
TGTCTGTGTG
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GCTGCTGGTG
(
3
)
8.2
0.0082
3T3 fibroblasts
GCTGCTGGTG
(
3
)
3.5
0.0035
E15 cortex
GCTGCTGGTG
(
3
)
14.8
0.0148
E15 cortex
GGCTGCCTGG
(
2
)
4.9
0.0049
P1 cortex
GCTGCTGGTG
(
3
)
13.6
0.0136
Hypothalamus
GCTGCTGGTG
(
3
)
18.1
0.0181
Hypothalamus
GGCTGCCTGG
(
2
)
1.8
0.0018
Hypothalamus
TGTCTGTGTG
(
3
)
1.8
0.0018
E12.5 retina
GCTGCTGGTG
(
3
)
5.6
0.0056
E14.5 retina
GCTGCTGGTG
(
3
)
14.6
0.0146
E14.5 retina
TGTCTGTGTG
(
3
)
1.8
0.0018
E16.5 retina
GCTGCTGGTG
(
3
)
12.7
0.0127
E18.5 retina
GCTGCTGGTG
(
3
)
34.6
0.0346
P0.5 retina
GCTGCTGGTG
(
3
)
5.9
0.0059
P0.5 retina
GGCTGCCTGG
(
2
)
3.9
0.0039
P2.5 retina
GCTGCTGGTG
(
3
)
17.6
0.0176
P2.5 retina
TGTCTGTGTG
(
3
)
1.8
0.0018
P4.5 retina
GCTGCTGGTG
(
3
)
19.8
0.0198
P6.5 retina
GCTGCTGGTG
(
3
)
15
0.015
P6.5 retina
TGTCTGTGTG
(
3
)
1.7
0.0017
P10.5 crx- retina
GCTGCTGGTG
(
3
)
3.7
0.0037
P10.5 crx- retina
TGTCTGTGTG
(
3
)
1.9
0.0019
P10.5 crx+ retina
GCTGCTGGTG
(
3
)
28.8
0.0288
P10.5 crx+ retina
GGCTGCCTGG
(
2
)
1.9
0.0019
Adult retinal
GCTGCTGGTG
(
3
)
11.1
0.0111
Adult retinal
TGTCTGTGTG
(
3
)
1.9
0.0019
ONL
GCTGCTGGTG
(
3
)
13.4
0.0134
ONL
GGCTGCCTGG
(
2
)
1.9
0.0019
