Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.289630	Ywhaq	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	12		22630
Gene Ontology	cellular_component unknown | chaperone activity | protein domain specific binding | protein targeting | signal transduction | small GTPase mediated signal transduction
Human Homolog	YWHAQ[tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 124 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGAGAGGGTA (2) 11.4 0.0114 P8 Cb GC CTCTTACTAC 8.2 0.0082 P8 Cb GC GGTCATCTTC (2) 3.3 0.0033 P8 Cb GC AAAGCCGTGA (2) 1.6 0.0016 P8 Cb GC CAGTTGCTTA (4) 1.6 0.0016 P8 Cb GC GATTTCTTAT (3) 1.6 0.0016 Cb medulloblastoma GATAAAAAAA (9) 18.5 0.0185 Cb medulloblastoma GGAGAGGGTA (2) 18.5 0.0185 Cb medulloblastoma GGTCATCTTC (2) 11.6 0.0116 Cb medulloblastoma CTCTTACTAC 4.6 0.0046 Cb medulloblastoma CAGTTGCTTA (4) 2.3 0.0023 Cb medulloblastoma CATTTCAACT (2) 2.3 0.0023 Cb medulloblastoma GAAAAGTATT (2) 2.3 0.0023 P8 GC+1d culture GGAGAGGGTA (2) 32 0.032 P8 GC+1d culture CTCTTACTAC 9.1 0.0091 P8 GC+1d culture GGTCATCTTC (2) 3.4 0.0034 P8 GC+1d culture CTACTTCTAT 2.3 0.0023 P8 GC+1d culture GATAAAAAAA (9) 2.3 0.0023 P8 GC+1d culture AAAGCCGTGA (2) 1.1 0.0011 P8 GC+1d culture CAGTTGCTTA (4) 1.1 0.0011 P8 GC+1d culture CTCTTAATAC (5) 1.1 0.0011 P8 GC+1d culture TTGCTGCCAG (3) 1.1 0.0011 P8 GC+SHH+1d culture GGAGAGGGTA (2) 22.2 0.0222 P8 GC+SHH+1d culture GGTCATCTTC (2) 12.9 0.0129 P8 GC+SHH+1d culture CTCTTACTAC 11.7 0.0117 P8 GC+SHH+1d culture GATAAAAAAA (9) 11.7 0.0117 P8 GC+SHH+1d culture CTCTTAATAC (5) 3.5 0.0035 P8 GC+SHH+1d culture GAAAAGTTGC (3) 3.5 0.0035 P8 GC+SHH+1d culture CAGTTGCTTA (4) 1.2 0.0012 P8 GC+SHH+1d culture CTACTTCTAT 1.2 0.0012 P8 GC+SHH+1d culture GAAAATTCCA (3) 1.2 0.0012 3T3 fibroblasts GGAGAGGGTA (2) 7 0.007 3T3 fibroblasts CAGTTGCTTA (4) 3.5 0.0035 3T3 fibroblasts TTGCTGCCAG (3) 3.5 0.0035 E15 cortex GGAGAGGGTA (2) 4.9 0.0049 P1 cortex GGTCATCTTC (2) 13.6 0.0136 P1 cortex CTCTTACTAC 9.1 0.0091 P1 cortex GGAGAGGGTA (2) 9.1 0.0091 Hypothalamus GGAGAGGGTA (2) 18.1 0.0181 Hypothalamus GAAAAGTTGC (3) 7.2 0.0072 Hypothalamus GGTCATCTTC (2) 7.2 0.0072 Hypothalamus CTCTTACTAC 5.4 0.0054 Hypothalamus GATAAAAAAA (9) 3.6 0.0036 Hypothalamus CTCTTAATAC (5) 1.8 0.0018 Hypothalamus GCGAGCGAGG 1.8 0.0018 Hypothalamus TCCTTTCTTA 1.8 0.0018 E12.5 retina GGAGAGGGTA (2) 28.2 0.0282 E12.5 retina GGTCATCTTC (2) 7.5 0.0075 E12.5 retina CAGTTGCTTA (4) 5.6 0.0056 E12.5 retina CTCTTACTAC 5.6 0.0056 E12.5 retina GATAAAAAAA (9) 3.8 0.0038 E12.5 retina GAAAAGTATT (2) 1.9 0.0019 E14.5 retina GGAGAGGGTA (2) 27.3 0.0273 E14.5 retina GGTCATCTTC (2) 10.9 0.0109 E14.5 retina CTCTTACTAC 7.3 0.0073 E14.5 retina GATAAAAAAA (9) 3.6 0.0036 E14.5 retina CAGTTGCTTA (4) 1.8 0.0018 E14.5 retina GAAAAGTATT (2) 1.8 0.0018 E14.5 retina GAAAAGTTGC (3) 1.8 0.0018 E14.5 retina GCGAGCGAGG 1.8 0.0018 E16.5 retina GGAGAGGGTA (2) 30.8 0.0308 E16.5 retina GGTCATCTTC (2) 7.2 0.0072 E16.5 retina TCCTTTCTTA 5.4 0.0054 E16.5 retina TTGCTGCCAG (3) 5.4 0.0054 E16.5 retina CTCTTACTAC 3.6 0.0036 E16.5 retina GAAAAGTTGC (3) 3.6 0.0036 E18.5 retina GGAGAGGGTA (2) 18.2 0.0182 E18.5 retina GGTCATCTTC (2) 14.6 0.0146 E18.5 retina GATAAAAAAA (9) 12.7 0.0127 E18.5 retina CTCTTACTAC 5.5 0.0055 E18.5 retina CAGTTGCTTA (4) 1.8 0.0018 E18.5 retina GATTTCTTAT (3) 1.8 0.0018 E18.5 retina TTGCTGCCAG (3) 1.8 0.0018 P0.5 retina GGAGAGGGTA (2) 29.4 0.0294 P0.5 retina CTCTTACTAC 15.7 0.0157 P0.5 retina CATTTCAACT (2) 2 0.002 P0.5 retina GAAAAGTATT (2) 2 0.002 P0.5 retina GAAAATTCCA (3) 2 0.002 P0.5 retina GATAAAAAAA (9) 2 0.002 P0.5 retina GGTCATCTTC (2) 2 0.002 P0.5 retina TTACATAAAG 2 0.002 P2.5 retina GGAGAGGGTA (2) 21.1 0.0211 P2.5 retina GGTCATCTTC (2) 12.3 0.0123 P2.5 retina GATAAAAAAA (9) 8.8 0.0088 P2.5 retina CTCTTACTAC 5.3 0.0053 P2.5 retina CAGTTGCTTA (4) 3.5 0.0035 P2.5 retina GAAAAGTTGC (3) 1.8 0.0018 P2.5 retina GAAAATTCCA (3) 1.8 0.0018 P4.5 retina GGAGAGGGTA (2) 27.7 0.0277 P4.5 retina GATAAAAAAA (9) 13.9 0.0139 P4.5 retina GGTCATCTTC (2) 11.9 0.0119 P4.5 retina CTCTTACTAC 2 0.002 P4.5 retina TTACATAAAG 2 0.002 P6.5 retina GGAGAGGGTA (2) 15 0.015 P6.5 retina GGTCATCTTC (2) 5 0.005 P6.5 retina CTCTTACTAC 3.3 0.0033 P6.5 retina GATAAAAAAA (9) 3.3 0.0033 P6.5 retina CAGTTGCTTA (4) 1.7 0.0017 P6.5 retina GAAAAGTTGC (3) 1.7 0.0017 P10.5 crx- retina GGAGAGGGTA (2) 39 0.039 P10.5 crx- retina CTCTTACTAC 7.4 0.0074 P10.5 crx- retina GGTCATCTTC (2) 7.4 0.0074 P10.5 crx- retina AAAGCCGTGA (2) 3.7 0.0037 P10.5 crx- retina GCGAGCGAGG 3.7 0.0037 P10.5 crx- retina TCCTTTCTTA 3.7 0.0037 P10.5 crx- retina CAGTTGCTTA (4) 1.9 0.0019 P10.5 crx- retina GAAAAGTTGC (3) 1.9 0.0019 P10.5 crx- retina TTACATAAAG 1.9 0.0019 P10.5 crx+ retina GGAGAGGGTA (2) 21.1 0.0211 P10.5 crx+ retina GGTCATCTTC (2) 11.5 0.0115 P10.5 crx+ retina CTCTTACTAC 7.7 0.0077 P10.5 crx+ retina GATAAAAAAA (9) 7.7 0.0077 P10.5 crx+ retina TTGCTGCCAG (3) 1.9 0.0019 Adult retinal GGAGAGGGTA (2) 13 0.013 Adult retinal GGTCATCTTC (2) 3.7 0.0037 Adult retinal CTCTTACTAC 1.9 0.0019 Adult retinal GAAAATTCCA (3) 1.9 0.0019 ONL GGAGAGGGTA (2) 7.7 0.0077 ONL CATTTCAACT (2) 1.9 0.0019 ONL CTCTTACTAC 1.9 0.0019 ONL GAAAAGTTGC (3) 1.9 0.0019 ONL GAAAATTCCA (3) 1.9 0.0019 ONL GATAAAAAAA (9) 1.9 0.0019 ONL GGTCATCTTC (2) 1.9 0.0019