Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.289645	Gtl2	GTL2, imprinted maternally expressed untranslated mRNA	12	12 F1 (12 54.0 cM)	17263
Human Homolog	MEG3[maternally expressed 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 186 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATCATCTCCT GCCTTGACCT (2) GTGCTTTCAA TGTAATACAA (2) TTAAGTAAAA 12.9 0.0129 Cb medulloblastoma ATGGGGTTGG (2) CTAAGTAAAA GCCTTGACCT (2) GGTGGGGGAG GTGCTTTCAA TGCCCAGTGC (2) TGTAATACAA (2) 60.1 0.0601 P8 GC+1d culture ATGGGGTTGG (2) CTGTCCTAAC CTTCTAAGCA (2) GCCTTGACCT (2) GTGCTTTCAA TTAAGTAAAA 7.8 0.0078 P8 GC+SHH+1d culture ATGGGGTTGG (2) GCCTTGACCT (2) GTGCTTTCAA TGCCAAGTTC (2) 10.5 0.0105 E15 cortex ACTGAATTAG ATGGGGTTGG (2) CAAAGAGAAC GGGATGGGGA TGCCCAGTGC (2) 39.4 0.0394 P1 cortex ACTGAATTAG AGAGCAAATG AGCTTGGCCT (2) ATCCTAGGTC ATGGGGTTGG (2) CTAAGTAAAA GGGATGGCCA GTGCTTTCAA TGCCCAGTGC (2) 231.8 0.2318 Hypothalamus AATAGGGGGC ACCTGAGCTC AGAGCAAATG AGCTTGGCCT (2) ATCCTAGGTC ATGGGGTTGG (2) CAAAGAGAAC CAGCGGAGAG CCGGCTGAAG CTAAGTAAAA CTAGGGGAGG CTGTCCTAAC GACCCTGAGA GAGGCTTGAA GCCTTGACCT (2) GGGATGGCCA GGGATGGGGA GGGGTGGGGC GGTGGGGGAG GTGCTTTCAA TGCCAAGTTC (2) TGCCCAGTGC (2) TGTAATACAA (2) TGTCTCAACC 209.8 0.2098 E12.5 retina GCCTTGACCT (2) GGGATGGGGA GTGCTTTCAA TGCCAAGTTC (2) 13.2 0.0132 E14.5 retina ATCATCTCCT ATCCTAGGTC ATGGGGTTGG (2) CTGTCCTAAC GCCGGTGGGC GTGCTTTCAA TGCCCAGTGC (2) TTAAGTAAAA 30.9 0.0309 E16.5 retina ACTGAATTAG ATGGGGTTGG (2) CCGGCTGAAG CTAAGTAAAA CTTCTAAGCA (2) GACCCTGAGA GCCTTGACCT (2) GGGATGGGGA GTCAGTGTCT GTGCTTTCAA TGCCCAGTGC (2) 50.6 0.0506 E18.5 retina AGAGCAAATG CAGCGGAGAG CTAAGTAAAA CTGTCCTAAC GCCTTGACCT (2) GGGATGGCCA GTGCTTTCAA TGCCCAGTGC (2) TGTAATACAA (2) TTAAGTAAAA 89 0.089 P0.5 retina ACTGAATTAG AGCTTGGCCT (2) ATCCTAGGTC ATGGGGTTGG (2) CTAAGTAAAA CTTCTAAGCA (2) GGGATGGCCA GTGCTTTCAA TGCCCAGTGC (2) 88.3 0.0883 P2.5 retina ACTGAATTAG AGCTTGGCCT (2) ATCCTAGGTC ATGGGGTTGG (2) CTAAGTAAAA GCCGGTGGGC GCCTTGACCT (2) GGGATGGCCA GGGGTGGGGC GTGCTTTCAA TGCCAAGTTC (2) TGCCCAGTGC (2) TGTAATACAA (2) TTAAGGAACA 111.1 0.1111 P4.5 retina AGAAACCTGT (2) AGAGCAAATG ATCATCTCCT ATGGGGTTGG (2) CTAAGTAAAA GACCCTGAGA GCCTTGACCT (2) GGGATGGCCA GGGATGGGGA GTCAGTGTCT GTGCTTTCAA TGCCCAGTGC (2) 124.8 0.1248 P6.5 retina AGAGCAAATG AGCTTGGCCT (2) ATCATCTCCT ATGGGGTTGG (2) CAGCGGAGAG CTAAGTAAAA CTTCTAAGCA (2) GCCGGTGGGC GCCTTGACCT (2) GGGATGGCCA GTCAGTGTCT GTGCTTTCAA TGCCCAGTGC (2) TGTAATACAA (2) TTAAGTAAAA 81.9 0.0819 P10.5 crx- retina ACCTGAGCTC AGAGCAAATG ATCCTAGGTC ATGGGGTTGG (2) CCGGCTGAAG CTAAGTAAAA GCCTTGACCT (2) GGGATGGCCA GGGATGGGGA GTCAGTGTCT GTGCTTTCAA TGCCCAGTGC (2) 89.4 0.0894 P10.5 crx+ retina AGAAACCTGT (2) AGCTTGGCCT (2) ATCCTAGGTC ATGGGGTTGG (2) CTAAGTAAAA CTTCTAAGCA (2) GCCTTGACCT (2) GGGGTGGGGC GTCAGTGTCT GTGCTTTCAA TGCCCAGTGC (2) TTAAGTAAAA 103.7 0.1037 Adult retinal ACTGAATTAG AGAAACCTGT (2) ATCCTAGGTC ATGGGGTTGG (2) CAAAGAGAAC CTAAGTAAAA GCCTTGACCT (2) GGGATGGCCA GGTGGGGGAG GTGCTTTCAA TGCCAAGTTC (2) TGCCCAGTGC (2) TGTAATACAA (2) 89.3 0.0893 ONL AGAGCAAATG ATGGGGTTGG (2) CTTCTAAGCA (2) GCCTTGACCT (2) GTGCTTTCAA TGTAATACAA (2) 21 0.021