Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.289657	Jak1	Janus kinase 1	4	4 46.3 cM	16451
Gene Ontology	ATP binding | cytoskeleton | intracellular signaling cascade | Janus kinase activity | kinase activity | protein amino acid phosphorylation | protein binding | protein kinase activity | protein-tyrosine kinase activity | transferase activity
Human Homolog	JAK1[Janus kinase 1 (a protein tyrosine kinase)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGTTTGAGGC (11) 4.9 0.0049 P8 Cb GC TATTTTTATA (12) 4.9 0.0049 P8 Cb GC ACACGAACAG (2) 1.6 0.0016 P8 Cb GC ATGAGACAGG (4) 1.6 0.0016 P8 Cb GC GGGTTCTGTG (4) 1.6 0.0016 P8 Cb GC GTGACTGGAA (3) 1.6 0.0016 Cb medulloblastoma ATGAGACAGG (4) 2.3 0.0023 Cb medulloblastoma GGGTTCTGTG (4) 2.3 0.0023 P8 GC+1d culture GGGTTCTGTG (4) 8 0.008 P8 GC+1d culture TATTTTTATA (12) 2.3 0.0023 P8 GC+SHH+1d culture GGGTTCTGTG (4) 3.5 0.0035 P8 GC+SHH+1d culture CTTCTTATTT 2.3 0.0023 P8 GC+SHH+1d culture AACAACATTT (3) 1.2 0.0012 P8 GC+SHH+1d culture ACACGAACAG (2) 1.2 0.0012 P8 GC+SHH+1d culture TATTTTTATA (12) 1.2 0.0012 3T3 fibroblasts AGTTTGAGGC (11) 7 0.007 3T3 fibroblasts GGGTTCTGTG (4) 3.5 0.0035 E15 cortex GTGACTGGAA (3) 9.9 0.0099 E15 cortex AGTTTGAGGC (11) 4.9 0.0049 E15 cortex ATGAGACAGG (4) 4.9 0.0049 P1 cortex AACAACATTT (3) 4.5 0.0045 P1 cortex ACACGAACAG (2) 4.5 0.0045 Hypothalamus AACCACCTCA (2) 1.8 0.0018 Hypothalamus TATTTTTATA (12) 1.8 0.0018 E14.5 retina AGTTTGAGGC (11) 1.8 0.0018 E14.5 retina GACCACTGTG 1.8 0.0018 E14.5 retina GGGTTCTGTG (4) 1.8 0.0018 E14.5 retina TATTTTTATA (12) 1.8 0.0018 E16.5 retina TATTTTTATA (12) 1.8 0.0018 E18.5 retina TATTTTTATA (12) 3.6 0.0036 P0.5 retina GGGTTCTGTG (4) 2 0.002 P0.5 retina GTGACTGGAA (3) 2 0.002 P2.5 retina GGGTTCTGTG (4) 7 0.007 P2.5 retina TATTTTTATA (12) 3.5 0.0035 P4.5 retina GGGTTCTGTG (4) 4 0.004 P4.5 retina AACCACCTCA (2) 2 0.002 P4.5 retina TATTTTTATA (12) 2 0.002 P6.5 retina GACCACTGTG 1.7 0.0017 P6.5 retina TATTTTTATA (12) 1.7 0.0017 P10.5 crx- retina CTTCTTATTT 1.9 0.0019 P10.5 crx- retina GACCACTGTG 1.9 0.0019 P10.5 crx+ retina AGTTTGAGGC (11) 1.9 0.0019 P10.5 crx+ retina GTGACTGGAA (3) 1.9 0.0019 Adult retinal AGTTTGAGGC (11) 5.6 0.0056 Adult retinal GGGTTCTGTG (4) 1.9 0.0019 Adult retinal TATTTTTATA (12) 1.9 0.0019