Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.289657	Jak1	Janus kinase 1	4	4 46.3 cM	16451
Gene Ontology	ATP binding | cytoskeleton | intracellular signaling cascade | Janus kinase activity | kinase activity | protein amino acid phosphorylation | protein binding | protein kinase activity | protein-tyrosine kinase activity | transferase activity
Human Homolog	JAK1[Janus kinase 1 (a protein tyrosine kinase)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACACGAACAG AGTTTGAGGC (3) ATGAGACAGG (2) GGGTTCTGTG (3) GTGACTGGAA (2) TATTTTTATA (3) 16.2 0.0162 Cb medulloblastoma ATGAGACAGG (2) GGGTTCTGTG (3) 4.6 0.0046 P8 GC+1d culture GGGTTCTGTG (3) TATTTTTATA (3) 10.3 0.0103 P8 GC+SHH+1d culture AACAACATTT (2) ACACGAACAG CTTCTTATTT GGGTTCTGTG (3) TATTTTTATA (3) 9.4 0.0094 3T3 fibroblasts AGTTTGAGGC (3) GGGTTCTGTG (3) 10.5 0.0105 E15 cortex AGTTTGAGGC (3) ATGAGACAGG (2) GTGACTGGAA (2) 19.7 0.0197 P1 cortex AACAACATTT (2) ACACGAACAG 9 0.009 Hypothalamus AACCACCTCA (2) TATTTTTATA (3) 3.6 0.0036 E14.5 retina AGTTTGAGGC (3) GACCACTGTG GGGTTCTGTG (3) TATTTTTATA (3) 7.2 0.0072 E16.5 retina TATTTTTATA (3) 1.8 0.0018 E18.5 retina TATTTTTATA (3) 3.6 0.0036 P0.5 retina GGGTTCTGTG (3) GTGACTGGAA (2) 4 0.004 P2.5 retina GGGTTCTGTG (3) TATTTTTATA (3) 10.5 0.0105 P4.5 retina AACCACCTCA (2) GGGTTCTGTG (3) TATTTTTATA (3) 8 0.008 P6.5 retina GACCACTGTG TATTTTTATA (3) 3.4 0.0034 P10.5 crx- retina CTTCTTATTT GACCACTGTG 3.8 0.0038 P10.5 crx+ retina AGTTTGAGGC (3) GTGACTGGAA (2) 3.8 0.0038 Adult retinal AGTTTGAGGC (3) GGGTTCTGTG (3) TATTTTTATA (3) 9.4 0.0094