Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.289662	Ddx3x	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	X	1 7.0 cM	13205
Mm.289662	Fin14	fibroblast growth factor inducible 14	X	6 42.0 cM	14209
Gene Ontology	integral to membrane
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTAGTGTTGA (3) GTATTTATAG (3) TAACTTAGCC (2) TGCTGTGCAT (2) TGGCAGTGGA (3) TGGTTATCTT (2) 55.4 0.0554 Cb medulloblastoma CTAGTGTTGA (3) GTATTTATAG (3) TGCTGTGCAT (2) TGGCAGTGGA (3) 23.1 0.0231 P8 GC+1d culture GTATTTATAG (3) TGCTGTGCAT (2) 21.6 0.0216 P8 GC+SHH+1d culture GTATTTATAG (3) TAACTTAGCC (2) TGCTGTGCAT (2) 35.1 0.0351 3T3 fibroblasts CTAGTGTTGA (3) TGCTGTGCAT (2) 14 0.014 E15 cortex CTAGTGTTGA (3) TGCTGTGCAT (2) 9.8 0.0098 P1 cortex CTAGTGTTGA (3) TGCTGTGCAT (2) 27.3 0.0273 Hypothalamus TAACTTAGCC (2) TGCTGTGCAT (2) TGGCAGTGGA (3) 25.3 0.0253 E12.5 retina CTAGTGTTGA (3) TAACTTAGCC (2) TGCTGTGCAT (2) 56.4 0.0564 E14.5 retina CTAGTGTTGA (3) TGCTGTGCAT (2) TGGTTATCTT (2) 29.1 0.0291 E16.5 retina CTAGTGTTGA (3) TGCTGTGCAT (2) TGGTTATCTT (2) 43.4 0.0434 E18.5 retina CTAGTGTTGA (3) GTATTTATAG (3) TGCTGTGCAT (2) 20 0.02 P0.5 retina CTAGTGTTGA (3) TAACTTAGCC (2) TGCTGTGCAT (2) TGGCAGTGGA (3) 37.3 0.0373 P2.5 retina CTAGTGTTGA (3) GTATTTATAG (3) TAACTTAGCC (2) TGCTGTGCAT (2) TGGCAGTGGA (3) 61.6 0.0616 P4.5 retina CTAGTGTTGA (3) GTATTTATAG (3) TGCTGTGCAT (2) TGGCAGTGGA (3) 29.8 0.0298 P6.5 retina CTAGTGTTGA (3) GTATTTATAG (3) TAACTTAGCC (2) TGCTGTGCAT (2) TGGCAGTGGA (3) 51.8 0.0518 P10.5 crx- retina TAACTTAGCC (2) TGCTGTGCAT (2) TGGCAGTGGA (3) 18.7 0.0187 P10.5 crx+ retina CTAGTGTTGA (3) GTATTTATAG (3) TAACTTAGCC (2) TGCTGTGCAT (2) 53.8 0.0538 Adult retinal TAACTTAGCC (2) TGCTGTGCAT (2) TGGTTATCTT (2) 20.5 0.0205 ONL TGCTGTGCAT (2) 21.1 0.0211