Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.289739	Slit2	slit homolog 2 (Drosophila)	5	5 B3	20563
Gene Ontology	axon guidance | axon guidance | calcium ion binding | cell adhesion | chemotaxis | extracellular space | follicle stimulating hormone receptor activity | G-protein coupled receptor protein signaling pathway | integral to membrane | metanephros development | neurogenesis | receptor binding | structural molecule activity
Human Homolog	SLIT2[slit homolog 2 (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 61 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGAAATGCAG (7) 3.3 0.0033 P8 Cb GC TCCTCACAAG (4) 1.6 0.0016 P8 GC+1d culture GGAAATGCAG (7) 2.3 0.0023 P8 GC+1d culture GATTTGATAA (4) 1.1 0.0011 P8 GC+1d culture GGAAGTGCAG (4) 1.1 0.0011 P8 GC+1d culture GGGACCTGGC (3) 1.1 0.0011 P8 GC+SHH+1d culture GGAAATGCAG (7) 9.4 0.0094 P8 GC+SHH+1d culture CTTTGTTGGG (2) 1.2 0.0012 P8 GC+SHH+1d culture GCTCCCTCCT (6) 1.2 0.0012 3T3 fibroblasts CTTTGTTGGG (2) 7 0.007 3T3 fibroblasts GCTCCCTCCT (6) 7 0.007 3T3 fibroblasts GCTTCTAAAG 3.5 0.0035 3T3 fibroblasts TCCTCACAAG (4) 3.5 0.0035 3T3 fibroblasts TGGCAGATAG (7) 3.5 0.0035 E15 cortex GGAAATGCAG (7) 19.8 0.0198 P1 cortex GGAAATGCAG (7) 4.5 0.0045 Hypothalamus GATTTGATAA (4) 1.8 0.0018 Hypothalamus GGAAATGCAG (7) 1.8 0.0018 Hypothalamus GGGACCTGGC (3) 1.8 0.0018 Hypothalamus TGGCAGATAG (7) 1.8 0.0018 E12.5 retina GGAAATGCAG (7) 7.5 0.0075 E12.5 retina CTTTGTTGGG (2) 3.8 0.0038 E14.5 retina CTTTGTTGGG (2) 7.3 0.0073 E14.5 retina GAAGTCATCT 1.8 0.0018 E16.5 retina GGAAATGCAG (7) 7.2 0.0072 E16.5 retina GGAAGTGCAG (4) 1.8 0.0018 E18.5 retina GGAAATGCAG (7) 5.5 0.0055 E18.5 retina CACTTCACTG (3) 1.8 0.0018 E18.5 retina CTTTGTTGGG (2) 1.8 0.0018 P0.5 retina ACTCCAAGTG (6) 3.9 0.0039 P0.5 retina GCTCCCTCCT (6) 3.9 0.0039 P0.5 retina GGAAATGCAG (7) 3.9 0.0039 P0.5 retina CTTTGTTGGG (2) 2 0.002 P2.5 retina GGAAATGCAG (7) 7 0.007 P2.5 retina ACTCCAAGTG (6) 1.8 0.0018 P2.5 retina CTTTGTTGGG (2) 1.8 0.0018 P4.5 retina GGAAATGCAG (7) 5.9 0.0059 P4.5 retina CTTTGTTGGG (2) 4 0.004 P4.5 retina ACTCCAAGTG (6) 2 0.002 P4.5 retina GATTTGATAA (4) 2 0.002 P6.5 retina CTTTGTTGGG (2) 11.7 0.0117 P6.5 retina GCTCCCTCCT (6) 5 0.005 P6.5 retina GGAAATGCAG (7) 5 0.005 P6.5 retina GCTTCTAAAG 3.3 0.0033 P6.5 retina ACTCCAAGTG (6) 1.7 0.0017 P6.5 retina CACTTCACTG (3) 1.7 0.0017 P10.5 crx- retina ACTCCAAGTG (6) 31.6 0.0316 P10.5 crx- retina GGAAATGCAG (7) 3.7 0.0037 P10.5 crx- retina GAAGTCATCT 1.9 0.0019 P10.5 crx- retina TGGCAGATAG (7) 1.9 0.0019 P10.5 crx+ retina ACTCCAAGTG (6) 11.5 0.0115 P10.5 crx+ retina CTTTGTTGGG (2) 11.5 0.0115 P10.5 crx+ retina GGAAATGCAG (7) 11.5 0.0115 P10.5 crx+ retina GAAGTCATCT 1.9 0.0019 P10.5 crx+ retina GCTCCCTCCT (6) 1.9 0.0019 Adult retinal ACTCCAAGTG (6) 11.1 0.0111 Adult retinal GGAAATGCAG (7) 7.4 0.0074 Adult retinal CTTTGTTGGG (2) 3.7 0.0037 Adult retinal CACTTCACTG (3) 1.9 0.0019 ONL GGAAATGCAG (7) 9.6 0.0096 ONL ACTCCAAGTG (6) 5.7 0.0057