Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.289739	Slit2	slit homolog 2 (Drosophila)	5	5 B3	20563
Gene Ontology	axon guidance | axon guidance | calcium ion binding | cell adhesion | chemotaxis | extracellular space | follicle stimulating hormone receptor activity | G-protein coupled receptor protein signaling pathway | integral to membrane | metanephros development | neurogenesis | receptor binding | structural molecule activity
Human Homolog	SLIT2[slit homolog 2 (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 61 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGAAATGCAG TCCTCACAAG (3) 4.9 0.0049 P8 GC+1d culture GATTTGATAA GGAAATGCAG GGAAGTGCAG (3) GGGACCTGGC 5.6 0.0056 P8 GC+SHH+1d culture CTTTGTTGGG GCTCCCTCCT (3) GGAAATGCAG 11.8 0.0118 3T3 fibroblasts CTTTGTTGGG GCTCCCTCCT (3) GCTTCTAAAG TCCTCACAAG (3) TGGCAGATAG (2) 24.5 0.0245 E15 cortex GGAAATGCAG 19.8 0.0198 P1 cortex GGAAATGCAG 4.5 0.0045 Hypothalamus GATTTGATAA GGAAATGCAG GGGACCTGGC TGGCAGATAG (2) 7.2 0.0072 E12.5 retina CTTTGTTGGG GGAAATGCAG 11.3 0.0113 E14.5 retina CTTTGTTGGG GAAGTCATCT 9.1 0.0091 E16.5 retina GGAAATGCAG GGAAGTGCAG (3) 9 0.009 E18.5 retina CACTTCACTG CTTTGTTGGG GGAAATGCAG 9.1 0.0091 P0.5 retina ACTCCAAGTG CTTTGTTGGG GCTCCCTCCT (3) GGAAATGCAG 13.7 0.0137 P2.5 retina ACTCCAAGTG CTTTGTTGGG GGAAATGCAG 10.6 0.0106 P4.5 retina ACTCCAAGTG CTTTGTTGGG GATTTGATAA GGAAATGCAG 13.9 0.0139 P6.5 retina ACTCCAAGTG CACTTCACTG CTTTGTTGGG GCTCCCTCCT (3) GCTTCTAAAG GGAAATGCAG 28.4 0.0284 P10.5 crx- retina ACTCCAAGTG GAAGTCATCT GGAAATGCAG TGGCAGATAG (2) 39.1 0.0391 P10.5 crx+ retina ACTCCAAGTG CTTTGTTGGG GAAGTCATCT GCTCCCTCCT (3) GGAAATGCAG 38.3 0.0383 Adult retinal ACTCCAAGTG CACTTCACTG CTTTGTTGGG GGAAATGCAG 24.1 0.0241 ONL ACTCCAAGTG GGAAATGCAG 15.3 0.0153