Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29027	Sparcl1	SPARC-like 1 (mast9, hevin)	5	5 E4 (5 55.0 cM)	13602
Gene Ontology	calcium ion binding | extracellular matrix | extracellular space
Human Homolog	SPARCL1[SPARC-like 1 (mast9, hevin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CATTAAGCTG CTGAGGAAGT GAACACTGCA GCGGCTATCT TGAGAGAAGA (2) 65.2 0.0652 Cb medulloblastoma CTGAGGAAGT GAACACTGCA GCGGCTATCT GTGGCTAACT 161.8 0.1618 P8 GC+1d culture CATTAAGCTG CTGAGGAAGT GCGGCTATCT 14.8 0.0148 P8 GC+SHH+1d culture AAAGCTGTGC (2) CATTAAGCTG CTGAGGAAGT TGCTAAGTCC (2) 13 0.013 E15 cortex CTGAGGAAGT 9.9 0.0099 P1 cortex CTGAGGAAGT 27.3 0.0273 Hypothalamus CATTAAGCTG CTGAGGAAGT GTGGCTAACT TGAGAGAAGA (2) TGCTAAGTCC (2) TTGTGAACAC 132.1 0.1321 E12.5 retina AAAGCTGTGC (2) CATTAAGCTG 7.5 0.0075 E14.5 retina TTGTGAACAC 1.8 0.0018 E16.5 retina CTGAGGAAGT 1.8 0.0018 E18.5 retina GAACACTGCA 5.5 0.0055 P0.5 retina GAAATGCAAT 2 0.002 P2.5 retina CATTAAGCTG CTGAGGAAGT 7.1 0.0071 P6.5 retina AAAGCTGTGC (2) CTGAGGAAGT GAAATGCAAT 10.1 0.0101 P10.5 crx- retina CTGAGGAAGT GTGGCTAACT TGAGAGAAGA (2) 33.5 0.0335 P10.5 crx+ retina CTGAGGAAGT 28.8 0.0288 Adult retinal CTGAGGAAGT GAAATGCAAT GAACACTGCA TGCTAAGTCC (2) TTGTGAACAC 31.7 0.0317 ONL AAAGCTGTGC (2) CATTAAGCTG CTGAGGAAGT GTGGCTAACT TTGTGAACAC 13.3 0.0133