Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.290442	Pkd1	polycystic kidney disease 1 homolog	17	17 A3.3 (17 10.4 cM)	18763
Gene Ontology	calcium channel activity | calcium ion transport | cartilage condensation | cell cycle arrest | cilium | heart development | integral to membrane | JAK-STAT cascade | membrane | neuropeptide signaling pathway | protein binding | sugar binding
Human Homolog	PKD1[polycystic kidney disease 1 (autosomal dominant)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 21 In Situ Hybridization Images

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SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTTCTCTCTG GCGGGTGGGG 6.5 0.0065 Cb medulloblastoma AAATAAACTG (2) CTTCTCTCTG GCGGGTGGGG 30 0.03 P8 GC+1d culture AAATAAACTG (2) GCGGGTGGGG 9.2 0.0092 P8 GC+SHH+1d culture AAATAAACTG (2) CTTCTCTCTG GCGGGTGGGG 15.2 0.0152 3T3 fibroblasts GCGGGTGGGG 17.5 0.0175 E15 cortex CTTCTCTCTG GCGGGTGGGG 34.6 0.0346 P1 cortex AAATAAACTG (2) CTTCTCTCTG GCGGGTGGGG 22.6 0.0226 Hypothalamus AAATAAACTG (2) CTTCTCTCTG GCGGGTGGGG 9 0.009 E12.5 retina AAATAAACTG (2) CTTCTCTCTG GCGGGTGGGG 20.7 0.0207 E14.5 retina AAATAAACTG (2) GCGGGTGGGG 20.1 0.0201 E16.5 retina AAATAAACTG (2) CTTCTCTCTG GCGGGTGGGG 23.6 0.0236 E18.5 retina AAATAAACTG (2) GCGGGTGGGG 9.1 0.0091 P0.5 retina AAATAAACTG (2) CTTCTCTCTG GCGGGTGGGG 11.8 0.0118 P2.5 retina AAATAAACTG (2) GCGGGTGGGG 24.7 0.0247 P4.5 retina AAATAAACTG (2) GCGGGTGGGG 11.8 0.0118 P6.5 retina AAATAAACTG (2) CTTCTCTCTG GCGGGTGGGG 33.3 0.0333 P10.5 crx- retina AAATAAACTG (2) GCGGGTGGGG 16.7 0.0167 P10.5 crx+ retina AAATAAACTG (2) CTTCTCTCTG GCGGGTGGGG 42.3 0.0423 Adult retinal GCGGGTGGGG 20.4 0.0204 ONL AAATAAACTG (2) GCGGGTGGGG 11.4 0.0114