Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.290692	Tkt	transketolase	14		21881
Gene Ontology	calcium ion binding | fertilization (sensu Animalia) | regulation of growth | transferase activity | transketolase activity | transketolase activity
Human Homolog	TKT[transketolase (Wernicke-Korsakoff syndrome)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 158 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGAAGATCA (4) 31 0.031 P8 Cb GC GGATGCTGGG (5) 31 0.031 P8 Cb GC GTGTGTGGTG (6) 17.9 0.0179 P8 Cb GC AGGCCTGGCT (6) 6.5 0.0065 P8 Cb GC GCCGAGCAGA (2) 4.9 0.0049 P8 Cb GC AGGCCTTGGC (5) 1.6 0.0016 P8 Cb GC GGCCTTGCTG (11) 1.6 0.0016 P8 Cb GC GGCTTTGCTG (6) 1.6 0.0016 P8 Cb GC TGCAAGCTGT (2) 1.6 0.0016 Cb medulloblastoma GGATGCTGGG (5) 18.5 0.0185 Cb medulloblastoma GTGTGTGGTG (6) 13.9 0.0139 Cb medulloblastoma AGGCCTGGCT (6) 11.6 0.0116 Cb medulloblastoma AAAGGAAAAA (15) 6.9 0.0069 Cb medulloblastoma GCCTCTGCTG (8) 4.6 0.0046 Cb medulloblastoma GCTTTGGCTG (5) 4.6 0.0046 Cb medulloblastoma AGGCCTTGGC (5) 2.3 0.0023 Cb medulloblastoma GAGGTTCTGG (5) 2.3 0.0023 Cb medulloblastoma GCCGAGCAGA (2) 2.3 0.0023 Cb medulloblastoma GCTGTTGCTG (3) 2.3 0.0023 Cb medulloblastoma GGCTTTGGTT (3) 2.3 0.0023 P8 GC+1d culture GGATGCTGGG (5) 29.7 0.0297 P8 GC+1d culture AGGAAGATCA (4) 10.3 0.0103 P8 GC+1d culture AGGCCTGGCT (6) 9.1 0.0091 P8 GC+1d culture GTGTGTGGTG (6) 5.7 0.0057 P8 GC+1d culture GCCTCTGCTG (8) 2.3 0.0023 P8 GC+1d culture GCTTTGGCTG (5) 2.3 0.0023 P8 GC+1d culture GCCGAGCAGA (2) 1.1 0.0011 P8 GC+1d culture GCCTTTGCTT 1.1 0.0011 P8 GC+1d culture GGCTTTGCTG (6) 1.1 0.0011 P8 GC+1d culture TGCGAGCAGA (4) 1.1 0.0011 P8 GC+SHH+1d culture GGATGCTGGG (5) 35.1 0.0351 P8 GC+SHH+1d culture AGGAAGATCA (4) 22.2 0.0222 P8 GC+SHH+1d culture GTGTGTGGTG (6) 19.9 0.0199 P8 GC+SHH+1d culture AGGCCTGGCT (6) 8.2 0.0082 P8 GC+SHH+1d culture GCTTTGGCTG (5) 4.7 0.0047 P8 GC+SHH+1d culture AAAGGAAAAA (15) 1.2 0.0012 P8 GC+SHH+1d culture GAGGTTCTGG (5) 1.2 0.0012 P8 GC+SHH+1d culture TGCAAGCTGT (2) 1.2 0.0012 P8 GC+SHH+1d culture TGCGAGCAGA (4) 1.2 0.0012 3T3 fibroblasts GTGTGTGGTG (6) 21 0.021 3T3 fibroblasts GGATGCTGGG (5) 17.5 0.0175 3T3 fibroblasts AGGCCTGGCT (6) 14 0.014 3T3 fibroblasts AGGAAGATCA (4) 7 0.007 3T3 fibroblasts GCTTTGGCTG (5) 3.5 0.0035 3T3 fibroblasts TGCAAGCTGT (2) 3.5 0.0035 3T3 fibroblasts TGCCTTTGCT (4) 3.5 0.0035 3T3 fibroblasts TGCGAGCAGA (4) 3.5 0.0035 E15 cortex GGATGCTGGG (5) 74.2 0.0742 E15 cortex GTGTGTGGTG (6) 24.7 0.0247 E15 cortex AGGAAGATCA (4) 9.9 0.0099 E15 cortex AAAGGAAAAA (15) 4.9 0.0049 E15 cortex AGGCCTGGCT (6) 4.9 0.0049 E15 cortex GCTTTGGCTG (5) 4.9 0.0049 P1 cortex AGGCCTGGCT (6) 13.6 0.0136 P1 cortex GGATGCTGGG (5) 9.1 0.0091 P1 cortex GTGTGTGGTG (6) 9.1 0.0091 P1 cortex GCCTCTGCTG (8) 4.5 0.0045 P1 cortex TGCCTTTGCT (4) 4.5 0.0045 Hypothalamus CAGCTCCCAA (6) 7.2 0.0072 Hypothalamus GGATGCTGGG (5) 7.2 0.0072 Hypothalamus GTGTGTGGTG (6) 7.2 0.0072 Hypothalamus GCTTTGGCTG (5) 3.6 0.0036 Hypothalamus AAAGGAAAAA (15) 1.8 0.0018 Hypothalamus AGGCCTTGGC (5) 1.8 0.0018 Hypothalamus GCCGAGCAGA (2) 1.8 0.0018 Hypothalamus GCCTCTGCTG (8) 1.8 0.0018 E12.5 retina GGATGCTGGG (5) 45.1 0.0451 E12.5 retina AGGAAGATCA (4) 11.3 0.0113 E12.5 retina GTGTGTGGTG (6) 11.3 0.0113 E12.5 retina AGGCCTGGCT (6) 1.9 0.0019 E14.5 retina GGATGCTGGG (5) 18.2 0.0182 E14.5 retina AGGAAGATCA (4) 9.1 0.0091 E14.5 retina GTGTGTGGTG (6) 9.1 0.0091 E14.5 retina GCTTTGGCTG (5) 3.6 0.0036 E14.5 retina AGGCCTGGCT (6) 1.8 0.0018 E16.5 retina GGATGCTGGG (5) 18.1 0.0181 E16.5 retina AGGAAGATCA (4) 14.5 0.0145 E16.5 retina GTGTGTGGTG (6) 7.2 0.0072 E16.5 retina AGGCCTTGGC (5) 3.6 0.0036 E16.5 retina CAGCTCCCAA (6) 3.6 0.0036 E16.5 retina AAAGGAAAAA (15) 1.8 0.0018 E16.5 retina GCCGAGCAGA (2) 1.8 0.0018 E16.5 retina GGCTTTGCTG (6) 1.8 0.0018 E16.5 retina TCCACCGTCT 1.8 0.0018 E18.5 retina GGATGCTGGG (5) 40 0.04 E18.5 retina AGGAAGATCA (4) 9.1 0.0091 E18.5 retina GTGTGTGGTG (6) 9.1 0.0091 E18.5 retina GCTTTGGCTG (5) 7.3 0.0073 E18.5 retina AAAGGAAAAA (15) 3.6 0.0036 E18.5 retina GAGGTTCTGG (5) 3.6 0.0036 E18.5 retina AGGCCTGGCT (6) 1.8 0.0018 E18.5 retina CAGCTCCCAA (6) 1.8 0.0018 E18.5 retina GCCTCTGCTG (8) 1.8 0.0018 E18.5 retina TGCAAGCTGT (2) 1.8 0.0018 P0.5 retina AGGAAGATCA (4) 23.6 0.0236 P0.5 retina GGATGCTGGG (5) 23.6 0.0236 P0.5 retina GTGTGTGGTG (6) 9.8 0.0098 P0.5 retina CAGCTCCCAA (6) 5.9 0.0059 P0.5 retina AGGCCTTGGC (5) 3.9 0.0039 P0.5 retina AGGCCTGGCT (6) 2 0.002 P0.5 retina GCCGAGCAGA (2) 2 0.002 P0.5 retina GCTTTGGCTG (5) 2 0.002 P0.5 retina TCCACCGTCT 2 0.002 P0.5 retina TGCCTTTGCT (4) 2 0.002 P2.5 retina GGATGCTGGG (5) 42.2 0.0422 P2.5 retina GTGTGTGGTG (6) 15.8 0.0158 P2.5 retina AGGAAGATCA (4) 12.3 0.0123 P2.5 retina CAGCTCCCAA (6) 5.3 0.0053 P2.5 retina AGGCCTGGCT (6) 3.5 0.0035 P2.5 retina GCCGAGCAGA (2) 3.5 0.0035 P4.5 retina GGATGCTGGG (5) 25.8 0.0258 P4.5 retina GTGTGTGGTG (6) 13.9 0.0139 P4.5 retina AGGAAGATCA (4) 9.9 0.0099 P4.5 retina AAAGGAAAAA (15) 4 0.004 P4.5 retina CAGCTCCCAA (6) 2 0.002 P4.5 retina GCCTTTGCTT 2 0.002 P4.5 retina TGCCTTTGCT (4) 2 0.002 P6.5 retina GTGTGTGGTG (6) 18.3 0.0183 P6.5 retina GGATGCTGGG (5) 6.7 0.0067 P6.5 retina AGGCCTGGCT (6) 1.7 0.0017 P6.5 retina CAGCTCCCAA (6) 1.7 0.0017 P6.5 retina GAGGTTCTGG (5) 1.7 0.0017 P6.5 retina GCCTCTGCTG (8) 1.7 0.0017 P6.5 retina GCTGTTGCTG (3) 1.7 0.0017 P6.5 retina GGCCTTGCTG (11) 1.7 0.0017 P10.5 crx- retina GGATGCTGGG (5) 26 0.026 P10.5 crx- retina GTGTGTGGTG (6) 13 0.013 P10.5 crx- retina CAGCTCCCAA (6) 11.1 0.0111 P10.5 crx- retina GCCTCTGCTG (8) 1.9 0.0019 P10.5 crx- retina GCTGTTGCTG (3) 1.9 0.0019 P10.5 crx- retina GCTTTGGCTG (5) 1.9 0.0019 P10.5 crx- retina GGCTTTGGTT (3) 1.9 0.0019 P10.5 crx+ retina GTGTGTGGTG (6) 28.8 0.0288 P10.5 crx+ retina GGATGCTGGG (5) 26.9 0.0269 P10.5 crx+ retina CAGCTCCCAA (6) 11.5 0.0115 P10.5 crx+ retina GCCGAGCAGA (2) 3.8 0.0038 P10.5 crx+ retina GGCTTTGGTT (3) 3.8 0.0038 P10.5 crx+ retina AAAGGAAAAA (15) 1.9 0.0019 P10.5 crx+ retina AGGCCTGGCT (6) 1.9 0.0019 P10.5 crx+ retina AGGCCTTGGC (5) 1.9 0.0019 P10.5 crx+ retina GCCTCTGCTG (8) 1.9 0.0019 P10.5 crx+ retina GCCTTTGCTT 1.9 0.0019 P10.5 crx+ retina TGCAAGCTGT (2) 1.9 0.0019 Adult retinal GGATGCTGGG (5) 24.1 0.0241 Adult retinal CAGCTCCCAA (6) 16.7 0.0167 Adult retinal GTGTGTGGTG (6) 11.1 0.0111 Adult retinal GCTTTGGCTG (5) 3.7 0.0037 Adult retinal AGGCCTTGGC (5) 1.9 0.0019 Adult retinal GCCGAGCAGA (2) 1.9 0.0019 Adult retinal GCCTCTGCTG (8) 1.9 0.0019 Adult retinal GCTGTTGCTG (3) 1.9 0.0019 Adult retinal GGCCTTGCTG (11) 1.9 0.0019 Adult retinal GGCTTTGCTG (6) 1.9 0.0019 ONL CAGCTCCCAA (6) 9.6 0.0096 ONL GTGTGTGGTG (6) 5.7 0.0057 ONL GGATGCTGGG (5) 3.8 0.0038 ONL GGCTTTGGTT (3) 1.9 0.0019 ONL TCCACCGTCT 1.9 0.0019