Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.290786	Rpl41	ribosomal protein L41	10		67945
Gene Ontology	protein biosynthesis | ribosome | structural constituent of ribosome
Human Homolog	RPL41[ribosomal protein L41]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 92 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGAGCGAAGT (5) 66.9 0.0669 P8 Cb GC GCGCAGGAGT (3) 14.7 0.0147 P8 Cb GC GAAACAGAAA (14) 3.3 0.0033 P8 Cb GC AAGTGCCACT (3) 1.6 0.0016 P8 Cb GC AGAGCGAGGT 1.6 0.0016 P8 Cb GC GACACATCCC (3) 1.6 0.0016 Cb medulloblastoma AGAGCGAAGT (5) 32.4 0.0324 Cb medulloblastoma GCGCAGGAGT (3) 13.9 0.0139 Cb medulloblastoma AAGTGCCACT (3) 2.3 0.0023 P8 GC+1d culture AGAGCGAAGT (5) 59.4 0.0594 P8 GC+1d culture GCGCAGGAGT (3) 5.7 0.0057 P8 GC+1d culture AAGTGCCACT (3) 2.3 0.0023 P8 GC+1d culture GACACATCCC (3) 1.1 0.0011 P8 GC+1d culture TTTCAGCACT (6) 1.1 0.0011 P8 GC+SHH+1d culture AGAGCGAAGT (5) 44.5 0.0445 P8 GC+SHH+1d culture GCGCAGGAGT (3) 14.1 0.0141 P8 GC+SHH+1d culture AAGTGCCACT (3) 5.9 0.0059 P8 GC+SHH+1d culture ACTAGTGCTT (80) 1.2 0.0012 P8 GC+SHH+1d culture CTTTTCCACT (4) 1.2 0.0012 3T3 fibroblasts AGAGCGAAGT (5) 872.7 0.8727 3T3 fibroblasts GCGCAGGAGT (3) 10.5 0.0105 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts AAGTGCCACT (3) 7 0.007 3T3 fibroblasts AGAGCGAAGG (2) 3.5 0.0035 3T3 fibroblasts AGAGCGAGGT 3.5 0.0035 E15 cortex AGAGCGAAGT (5) 202.9 0.2029 E15 cortex AGAGCGAAGG (2) 9.9 0.0099 E15 cortex GCGCAGGAGT (3) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex AGAGCGAAGT (5) 150 0.15 P1 cortex AGAGCGAAGC 4.5 0.0045 P1 cortex AGAGCGAAGG (2) 4.5 0.0045 Hypothalamus AGAGCGAAGT (5) 14.5 0.0145 Hypothalamus GCGCAGGAGT (3) 14.5 0.0145 E12.5 retina AGAGCGAAGT (5) 97.6 0.0976 E12.5 retina GCGCAGGAGT (3) 16.9 0.0169 E12.5 retina AAGTGCCACT (3) 1.9 0.0019 E12.5 retina ACTAGTGCTT (80) 1.9 0.0019 E12.5 retina AGAGCGAGGT 1.9 0.0019 E12.5 retina GAAACAGAAA (14) 1.9 0.0019 E12.5 retina GGGGATCAGT (9) 1.9 0.0019 E12.5 retina TTTCAGCACT (6) 1.9 0.0019 E14.5 retina GAAACAGAAA (14) 5.5 0.0055 E14.5 retina GCGCAGGAGT (3) 5.5 0.0055 E14.5 retina AGAGCGAAGT (5) 1.8 0.0018 E16.5 retina AGAGCGAAGT (5) 5.4 0.0054 E16.5 retina GCGCAGGAGT (3) 3.6 0.0036 E16.5 retina AAGTGCCACT (3) 1.8 0.0018 E16.5 retina TTTCAGCACT (6) 1.8 0.0018 E18.5 retina AGAGCGAAGT (5) 23.6 0.0236 E18.5 retina GCGCAGGAGT (3) 9.1 0.0091 E18.5 retina GAAACAGAAA (14) 5.5 0.0055 E18.5 retina AAGTGCCACT (3) 1.8 0.0018 P0.5 retina AGAGCGAAGT (5) 80.5 0.0805 P0.5 retina GCGCAGGAGT (3) 49.1 0.0491 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina AGAGCGAAGC 2 0.002 P0.5 retina CTTTTCCACT (4) 2 0.002 P2.5 retina AGAGCGAAGT (5) 21.1 0.0211 P2.5 retina GCGCAGGAGT (3) 12.3 0.0123 P2.5 retina AAGTGCCACT (3) 1.8 0.0018 P2.5 retina AGAGCGAAGC 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina AGAGCGAAGT (5) 25.8 0.0258 P4.5 retina GCGCAGGAGT (3) 9.9 0.0099 P4.5 retina ACTAGTGCTT (80) 2 0.002 P4.5 retina AGAGCGAAGG (2) 2 0.002 P4.5 retina AGAGCGAGGT 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina AGAGCGAAGT (5) 28.3 0.0283 P6.5 retina GCGCAGGAGT (3) 10 0.01 P6.5 retina GAAACAGAAA (14) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P10.5 crx- retina AGAGCGAAGT (5) 26 0.026 P10.5 crx- retina GCGCAGGAGT (3) 3.7 0.0037 P10.5 crx- retina GGGGATCAGT (9) 1.9 0.0019 P10.5 crx+ retina AGAGCGAAGT (5) 65.4 0.0654 P10.5 crx+ retina GCGCAGGAGT (3) 21.1 0.0211 P10.5 crx+ retina AAGTGCCACT (3) 1.9 0.0019 P10.5 crx+ retina AGAGCGAAGG (2) 1.9 0.0019 P10.5 crx+ retina GACACATCCC (3) 1.9 0.0019 P10.5 crx+ retina GGGGATCAGT (9) 1.9 0.0019 Adult retinal AGAGCGAAGT (5) 38.9 0.0389 Adult retinal GCGCAGGAGT (3) 13 0.013 Adult retinal AGAGCGAAGG (2) 1.9 0.0019 Adult retinal GAAACAGAAA (14) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL AGAGCGAAGT (5) 61.3 0.0613 ONL GAAACAGAAA (14) 7.7 0.0077 ONL GTCATAGCTG (590) 5.7 0.0057 ONL AAGTGCCACT (3) 3.8 0.0038 ONL CTTTTCCACT (4) 1.9 0.0019