Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.291059	Orc4l	origin recognition complex, subunit 4-like (S. cerevisiae)	2		26428
Mm.291059	C030012N03Rik	RIKEN cDNA C030012N03 gene	2		319333
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 60 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGAGTGTCT (3) GACACAGTTT (2) GATCTTGTTT (3) GGGATGGAAT (3) TTAAATAAAA (4) 11.4 0.0114 Cb medulloblastoma CAGAGTGTCT (3) 4.6 0.0046 P8 GC+1d culture CGTGGTCATT (2) GAAATAGAAG (3) GACACAGTTT (2) GATCTTGTTT (3) GGGATGGAAT (3) TTAAATAAAA (4) 10.2 0.0102 P8 GC+SHH+1d culture CGTGGTCATT (2) GACACAGTTT (2) GATCTTGTTT (3) TTAAATAAAA (4) 7.1 0.0071 3T3 fibroblasts GGGATGGAAT (3) 3.5 0.0035 P1 cortex CAGAGTGTCT (3) CTATGTTGGT (2) TTAAATAAAA (4) 31.8 0.0318 Hypothalamus CAGAGTGTCT (3) CTATGTTGGT (2) GAAATAGAAG (3) GACACAGTTT (2) 9 0.009 E12.5 retina GACACAGTTT (2) GGGATGGAAT (3) 5.7 0.0057 E14.5 retina CTATGTTGGT (2) GATCTTGTTT (3) 3.6 0.0036 E16.5 retina GACACAGTTT (2) GGGATGGAAT (3) 3.6 0.0036 E18.5 retina GACACAGTTT (2) GATCTTGTTT (3) TTAAATAAAA (4) 10.8 0.0108 P0.5 retina GACACAGTTT (2) GATCTTGTTT (3) GGGATGGAAT (3) TTAAATAAAA (4) 11.8 0.0118 P2.5 retina GACACAGTTT (2) GATCTTGTTT (3) TTAAATAAAA (4) 14 0.014 P4.5 retina CAGAGTGTCT (3) CGTGGTCATT (2) GACACAGTTT (2) GGGATGGAAT (3) 13.9 0.0139 P6.5 retina CAGAGTGTCT (3) GACACAGTTT (2) GGGATGGAAT (3) TTAAATAAAA (4) 11.8 0.0118 P10.5 crx- retina GACACAGTTT (2) GGGATGGAAT (3) TTAAATAAAA (4) 9.4 0.0094 P10.5 crx+ retina CAGAGTGTCT (3) GACACAGTTT (2) GATCTTGTTT (3) GGGATGGAAT (3) 15.3 0.0153 Adult retinal GACACAGTTT (2) GGGATGGAAT (3) 3.8 0.0038 ONL GAAATAGAAG (3) GGGATGGAAT (3) TTAAATAAAA (4) 7.6 0.0076