Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29114	Gnpat	glyceronephosphate O-acyltransferase	8	8 78.8 cM	14712
Gene Ontology	acyltransferase activity | catalytic activity | ether lipid biosynthesis | ether lipid biosynthesis | glycerone-phosphate O-acyltransferase activity | glycerone-phosphate O-acyltransferase activity | membrane | membrane organization and biogenesis | metabolism | peroxisomal matrix | peroxisome | transferase activity
Human Homolog	GNPAT[glyceronephosphate O-acyltransferase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCCCAAATG (4) 1.6 0.0016 Cb medulloblastoma TGCTCTGCCT (20) 2.3 0.0023 P8 GC+1d culture TGCTCTGCCT (20) 10.3 0.0103 P8 GC+1d culture TCTAGATTAG (2) 4.6 0.0046 P8 GC+1d culture GGAGTGTCGG (3) 3.4 0.0034 P8 GC+1d culture GAGCTGTGGG (3) 1.1 0.0011 P8 GC+SHH+1d culture TGCTCTGCCT (20) 9.4 0.0094 P8 GC+SHH+1d culture TCTAGATTAG (2) 4.7 0.0047 P8 GC+SHH+1d culture GGAGTGTCGG (3) 2.3 0.0023 P8 GC+SHH+1d culture AACGTCCTAG (2) 1.2 0.0012 3T3 fibroblasts GGGCGGACTT (2) 14 0.014 3T3 fibroblasts GCCCCAAATG (4) 3.5 0.0035 3T3 fibroblasts TCTAGATTAG (2) 3.5 0.0035 3T3 fibroblasts TGCTCTGCCT (20) 3.5 0.0035 E15 cortex TGCTCTGCCT (20) 4.9 0.0049 P1 cortex TGCTCTGCCT (20) 22.7 0.0227 P1 cortex GCTCAGAGGT 4.5 0.0045 P1 cortex TCTAGATTAG (2) 4.5 0.0045 Hypothalamus TGCTCTGCCT (20) 7.2 0.0072 Hypothalamus TCTAGATTAG (2) 3.6 0.0036 E12.5 retina TCTAGATTAG (2) 9.4 0.0094 E12.5 retina TGCTCTGCCT (20) 1.9 0.0019 E14.5 retina TCTAGATTAG (2) 5.5 0.0055 E14.5 retina TGCTCTGCCT (20) 1.8 0.0018 E16.5 retina TCTAGATTAG (2) 9.1 0.0091 E16.5 retina TGCTCTGCCT (20) 3.6 0.0036 E16.5 retina GAGCTGTGGG (3) 1.8 0.0018 E16.5 retina GCCCCAAATG (4) 1.8 0.0018 E16.5 retina GGAGTGTCGG (3) 1.8 0.0018 E18.5 retina TCTAGATTAG (2) 5.5 0.0055 E18.5 retina TGCTCTGCCT (20) 5.5 0.0055 E18.5 retina GGGCGGACTT (2) 1.8 0.0018 P0.5 retina TCTAGATTAG (2) 5.9 0.0059 P0.5 retina TGCTCTGCCT (20) 3.9 0.0039 P2.5 retina TGCTCTGCCT (20) 10.6 0.0106 P2.5 retina AACGTCCTAG (2) 5.3 0.0053 P2.5 retina GGAGTGTCGG (3) 3.5 0.0035 P2.5 retina TCTAGATTAG (2) 3.5 0.0035 P4.5 retina TGCTCTGCCT (20) 9.9 0.0099 P4.5 retina AACGTCCTAG (2) 2 0.002 P4.5 retina TCTAGATTAG (2) 2 0.002 P6.5 retina TCTAGATTAG (2) 6.7 0.0067 P6.5 retina AACGTCCTAG (2) 3.3 0.0033 P6.5 retina TGCTCTGCCT (20) 3.3 0.0033 P6.5 retina GCTCAGAGGT 1.7 0.0017 P10.5 crx- retina TCTAGATTAG (2) 14.9 0.0149 P10.5 crx- retina AACGTCCTAG (2) 7.4 0.0074 P10.5 crx- retina TGCTCTGCCT (20) 3.7 0.0037 P10.5 crx+ retina TGCTCTGCCT (20) 23.1 0.0231 P10.5 crx+ retina AACGTCCTAG (2) 3.8 0.0038 P10.5 crx+ retina GGAGTGTCGG (3) 3.8 0.0038 P10.5 crx+ retina TCTAGATTAG (2) 1.9 0.0019 Adult retinal TGCTCTGCCT (20) 16.7 0.0167 Adult retinal GAGCTGTGGG (3) 3.7 0.0037 Adult retinal TCTAGATTAG (2) 3.7 0.0037 Adult retinal GCCCCAAATG (4) 1.9 0.0019 ONL TCTAGATTAG (2) 5.7 0.0057 ONL GCTCAGAGGT 1.9 0.0019