Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29114	Gnpat	glyceronephosphate O-acyltransferase	8	8 78.8 cM	14712
Gene Ontology	acyltransferase activity | catalytic activity | ether lipid biosynthesis | ether lipid biosynthesis | glycerone-phosphate O-acyltransferase activity | glycerone-phosphate O-acyltransferase activity | membrane | membrane organization and biogenesis | metabolism | peroxisomal matrix | peroxisome | transferase activity
Human Homolog	GNPAT[glyceronephosphate O-acyltransferase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCCCAAATG 1.6 0.0016 Cb medulloblastoma TGCTCTGCCT (2) 2.3 0.0023 P8 GC+1d culture GAGCTGTGGG (2) GGAGTGTCGG TCTAGATTAG TGCTCTGCCT (2) 19.4 0.0194 P8 GC+SHH+1d culture AACGTCCTAG GGAGTGTCGG TCTAGATTAG TGCTCTGCCT (2) 17.6 0.0176 3T3 fibroblasts GCCCCAAATG GGGCGGACTT TCTAGATTAG TGCTCTGCCT (2) 24.5 0.0245 E15 cortex TGCTCTGCCT (2) 4.9 0.0049 P1 cortex GCTCAGAGGT TCTAGATTAG TGCTCTGCCT (2) 31.7 0.0317 Hypothalamus TCTAGATTAG TGCTCTGCCT (2) 10.8 0.0108 E12.5 retina TCTAGATTAG TGCTCTGCCT (2) 11.3 0.0113 E14.5 retina TCTAGATTAG TGCTCTGCCT (2) 7.3 0.0073 E16.5 retina GAGCTGTGGG (2) GCCCCAAATG GGAGTGTCGG TCTAGATTAG TGCTCTGCCT (2) 18.1 0.0181 E18.5 retina GGGCGGACTT TCTAGATTAG TGCTCTGCCT (2) 12.8 0.0128 P0.5 retina TCTAGATTAG TGCTCTGCCT (2) 9.8 0.0098 P2.5 retina AACGTCCTAG GGAGTGTCGG TCTAGATTAG TGCTCTGCCT (2) 22.9 0.0229 P4.5 retina AACGTCCTAG TCTAGATTAG TGCTCTGCCT (2) 13.9 0.0139 P6.5 retina AACGTCCTAG GCTCAGAGGT TCTAGATTAG TGCTCTGCCT (2) 15 0.015 P10.5 crx- retina AACGTCCTAG TCTAGATTAG TGCTCTGCCT (2) 26 0.026 P10.5 crx+ retina AACGTCCTAG GGAGTGTCGG TCTAGATTAG TGCTCTGCCT (2) 32.6 0.0326 Adult retinal GAGCTGTGGG (2) GCCCCAAATG TCTAGATTAG TGCTCTGCCT (2) 26 0.026 ONL GCTCAGAGGT TCTAGATTAG 7.6 0.0076