Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.291291
1110020K19Rik
RIKEN cDNA 1110020K19 gene
17
68586
Mm.291291
F830021D11Rik
RIKEN cDNA F830021D11 gene
17
224648
Human Homolog
C6orf107[chromosome 6 open reading frame 107]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAGAAGTCTG (
10
)
24.5
0.0245
P8 Cb GC
TGCTGGAAAT (
6
)
3.3
0.0033
Cb medulloblastoma
TGCTGGAAAT (
6
)
13.9
0.0139
Cb medulloblastoma
GAGAAGTCTG (
10
)
9.2
0.0092
Cb medulloblastoma
CTTTTTGTGG
(
2
)
2.3
0.0023
Cb medulloblastoma
TGCAAACAGA
(
15
)
2.3
0.0023
P8 GC+1d culture
GAGAAGTCTG (
10
)
9.1
0.0091
P8 GC+1d culture
ATTCTGTGGC (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GAGAAGTCTG (
10
)
23.4
0.0234
P8 GC+SHH+1d culture
TGCTGGAAAT (
6
)
3.5
0.0035
P8 GC+SHH+1d culture
ATTCTGTGGC (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
CTTTTTGTGG
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TGCAAACAGA
(
15
)
1.2
0.0012
3T3 fibroblasts
GAGAAGTCTG (
10
)
10.5
0.0105
3T3 fibroblasts
TGCTGGAAAT (
6
)
7
0.007
E15 cortex
TGCTGGAAAT (
6
)
9.9
0.0099
Hypothalamus
GAGAAGTCTG (
10
)
5.4
0.0054
Hypothalamus
AAGAGTGCAG
(
3
)
1.8
0.0018
E12.5 retina
GAGAAGTCTG (
10
)
7.5
0.0075
E14.5 retina
GAGAAGTCTG (
10
)
9.1
0.0091
E14.5 retina
TGCAAACAGA
(
15
)
3.6
0.0036
E16.5 retina
GAGAAGTCTG (
10
)
30.8
0.0308
E16.5 retina
AAGAGTGCAG
(
3
)
1.8
0.0018
E16.5 retina
TGCTGGAAAT (
6
)
1.8
0.0018
E18.5 retina
GAGAAGTCTG (
10
)
12.7
0.0127
E18.5 retina
AAGAGTGCAG
(
3
)
1.8
0.0018
P0.5 retina
GAGAAGTCTG (
10
)
13.7
0.0137
P0.5 retina
CTTTTTGTGG
(
2
)
2
0.002
P2.5 retina
GAGAAGTCTG (
10
)
14.1
0.0141
P2.5 retina
AAGAGTGCAG
(
3
)
3.5
0.0035
P2.5 retina
ATTCTGTGGC (
3
)
1.8
0.0018
P4.5 retina
GAGAAGTCTG (
10
)
4
0.004
P6.5 retina
GAGAAGTCTG (
10
)
5
0.005
P6.5 retina
TGCTGGAAAT (
6
)
3.3
0.0033
P6.5 retina
ATTCTGTGGC (
3
)
1.7
0.0017
P6.5 retina
CTTTTTGTGG
(
2
)
1.7
0.0017
P6.5 retina
TGCAAACAGA
(
15
)
1.7
0.0017
P10.5 crx- retina
GAGAAGTCTG (
10
)
5.6
0.0056
P10.5 crx- retina
TGCAAACAGA
(
15
)
3.7
0.0037
P10.5 crx+ retina
GAGAAGTCTG (
10
)
1.9
0.0019
P10.5 crx+ retina
TGCTGGAAAT (
6
)
1.9
0.0019
Adult retinal
GAGAAGTCTG (
10
)
1.9
0.0019
