Mouse Retina SAGE Library
[
Home
] [
Libraries
] [
Images
]
Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.291291
1110020K19Rik
RIKEN cDNA 1110020K19 gene
17
68586
Mm.291291
F830021D11Rik
RIKEN cDNA F830021D11 gene
17
224648
Human Homolog
C6orf107[chromosome 6 open reading frame 107]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAGAAGTCTG
TGCTGGAAAT (
2
)
27.8
0.0278
Cb medulloblastoma
CTTTTTGTGG
(
2
)
GAGAAGTCTG
TGCAAACAGA
(
2
)
TGCTGGAAAT (
2
)
27.7
0.0277
P8 GC+1d culture
ATTCTGTGGC
GAGAAGTCTG
10.2
0.0102
P8 GC+SHH+1d culture
ATTCTGTGGC
CTTTTTGTGG
(
2
)
GAGAAGTCTG
TGCAAACAGA
(
2
)
TGCTGGAAAT (
2
)
30.5
0.0305
3T3 fibroblasts
GAGAAGTCTG
TGCTGGAAAT (
2
)
17.5
0.0175
E15 cortex
TGCTGGAAAT (
2
)
9.9
0.0099
Hypothalamus
AAGAGTGCAG
(
2
)
GAGAAGTCTG
7.2
0.0072
E12.5 retina
GAGAAGTCTG
7.5
0.0075
E14.5 retina
GAGAAGTCTG
TGCAAACAGA
(
2
)
12.7
0.0127
E16.5 retina
AAGAGTGCAG
(
2
)
GAGAAGTCTG
TGCTGGAAAT (
2
)
34.4
0.0344
E18.5 retina
AAGAGTGCAG
(
2
)
GAGAAGTCTG
14.5
0.0145
P0.5 retina
CTTTTTGTGG
(
2
)
GAGAAGTCTG
15.7
0.0157
P2.5 retina
AAGAGTGCAG
(
2
)
ATTCTGTGGC
GAGAAGTCTG
19.4
0.0194
P4.5 retina
GAGAAGTCTG
4
0.004
P6.5 retina
ATTCTGTGGC
CTTTTTGTGG
(
2
)
GAGAAGTCTG
TGCAAACAGA
(
2
)
TGCTGGAAAT (
2
)
13.4
0.0134
P10.5 crx- retina
GAGAAGTCTG
TGCAAACAGA
(
2
)
9.3
0.0093
P10.5 crx+ retina
GAGAAGTCTG
TGCTGGAAAT (
2
)
3.8
0.0038
Adult retinal
GAGAAGTCTG
1.9
0.0019
