Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.291326	Mgrn1	mahogunin, ring finger 1	16	16 2.0 cM	17237
Gene Ontology	protein polyubiquitination | ubiquitin-protein ligase activity
Human Homolog	MGRN1[mahogunin, ring finger 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGCAATAAA (3) 8.2 0.0082 P8 Cb GC AAACATAGTT 1.6 0.0016 P8 Cb GC CAGCAAAAAA (5) 1.6 0.0016 P8 Cb GC GGCCTCTTCT (3) 1.6 0.0016 Cb medulloblastoma CAGCAATAAA (3) 18.5 0.0185 Cb medulloblastoma GGCCTCTTCT (3) 4.6 0.0046 Cb medulloblastoma TGGCCACTGG (9) 4.6 0.0046 Cb medulloblastoma CAGCAAAAAA (5) 2.3 0.0023 Cb medulloblastoma CAGCATAAAA 2.3 0.0023 P8 GC+1d culture CAGCAATAAA (3) 9.1 0.0091 P8 GC+1d culture AAACATAGTT 1.1 0.0011 P8 GC+1d culture CAGCAATATT (3) 1.1 0.0011 P8 GC+1d culture CAGGCAAGAC (3) 1.1 0.0011 P8 GC+1d culture TGGCCACTGG (9) 1.1 0.0011 P8 GC+SHH+1d culture CAGCAATAAA (3) 10.5 0.0105 P8 GC+SHH+1d culture CAGCAAAAAA (5) 1.2 0.0012 P8 GC+SHH+1d culture CAGCAATATT (3) 1.2 0.0012 P8 GC+SHH+1d culture GGCCTCTTCT (3) 1.2 0.0012 3T3 fibroblasts GGCCTCTTCT (3) 17.5 0.0175 3T3 fibroblasts GAGACGCCAA (2) 3.5 0.0035 E15 cortex GGCCTCTTCT (3) 29.7 0.0297 E15 cortex AGTGGCCCAG (2) 9.9 0.0099 P1 cortex AAACATAGTT 4.5 0.0045 P1 cortex AGTGGCCCAG (2) 4.5 0.0045 P1 cortex CAGCAATAAA (3) 4.5 0.0045 Hypothalamus CAGCAATAAA (3) 16.3 0.0163 Hypothalamus CAGCAAAAAA (5) 1.8 0.0018 Hypothalamus CAGCAATATT (3) 1.8 0.0018 Hypothalamus CAGGCAAGAC (3) 1.8 0.0018 Hypothalamus GAGACGCCAA (2) 1.8 0.0018 Hypothalamus GGCCTCTTCT (3) 1.8 0.0018 Hypothalamus TGGCCACTGG (9) 1.8 0.0018 E12.5 retina CAGCAAAAAA (5) 3.8 0.0038 E12.5 retina CAGCAATAAA (3) 1.9 0.0019 E12.5 retina CAGGCAAGAC (3) 1.9 0.0019 E12.5 retina TGTGCACATA (5) 1.9 0.0019 E14.5 retina CAGCAATAAA (3) 12.8 0.0128 E14.5 retina CAGCAAAAAA (5) 1.8 0.0018 E14.5 retina GGCCTCTTCT (3) 1.8 0.0018 E16.5 retina CAGCAATAAA (3) 9.1 0.0091 E16.5 retina GGAGGAGAGA (9) 1.8 0.0018 E18.5 retina CAGCAATAAA (3) 20 0.02 E18.5 retina CAGCAAAAAA (5) 7.3 0.0073 E18.5 retina GGACTCCTGG (5) 3.6 0.0036 E18.5 retina GGCCTCTTCT (3) 1.8 0.0018 P0.5 retina CAGCAATAAA (3) 9.8 0.0098 P0.5 retina GGCCTCTTCT (3) 3.9 0.0039 P0.5 retina AAACATAGTT 2 0.002 P0.5 retina TGGCCACTGG (9) 2 0.002 P2.5 retina CAGCAATAAA (3) 14.1 0.0141 P2.5 retina CAGCAAAAAA (5) 3.5 0.0035 P2.5 retina AAACATAGTT 1.8 0.0018 P2.5 retina GAGACGCCAA (2) 1.8 0.0018 P2.5 retina TGGCCACTGG (9) 1.8 0.0018 P4.5 retina CAGCAATAAA (3) 17.8 0.0178 P4.5 retina AAACATAGTT 2 0.002 P6.5 retina CAGCAATAAA (3) 25 0.025 P6.5 retina GGACTCCTGG (5) 3.3 0.0033 P6.5 retina GGAGGAGAGA (9) 3.3 0.0033 P6.5 retina AAACATAGTT 1.7 0.0017 P6.5 retina CAGCAAAAAA (5) 1.7 0.0017 P6.5 retina TGGCCACTGG (9) 1.7 0.0017 P10.5 crx- retina CAGCAATAAA (3) 9.3 0.0093 P10.5 crx- retina AGTGGCCCAG (2) 1.9 0.0019 P10.5 crx- retina CAGCAAAAAA (5) 1.9 0.0019 P10.5 crx- retina CAGGCAAGAC (3) 1.9 0.0019 P10.5 crx- retina GGACTCCTGG (5) 1.9 0.0019 P10.5 crx- retina TGGCCACTGG (9) 1.9 0.0019 P10.5 crx- retina TGTGCACATA (5) 1.9 0.0019 P10.5 crx+ retina CAGCAATAAA (3) 13.5 0.0135 P10.5 crx+ retina CAGCAAAAAA (5) 1.9 0.0019 P10.5 crx+ retina GGAGGAGAGA (9) 1.9 0.0019 Adult retinal CAGCAATAAA (3) 11.1 0.0111 Adult retinal CAGGCAAGAC (3) 3.7 0.0037 ONL CAGCAATAAA (3) 5.7 0.0057 ONL CAGGCAAGAC (3) 3.8 0.0038 ONL TGTGCACATA (5) 3.8 0.0038