Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.291326	Mgrn1	mahogunin, ring finger 1	16	16 2.0 cM	17237
Gene Ontology	protein polyubiquitination | ubiquitin-protein ligase activity
Human Homolog	MGRN1[mahogunin, ring finger 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAACATAGTT CAGCAAAAAA (2) CAGCAATAAA GGCCTCTTCT 13 0.013 Cb medulloblastoma CAGCAAAAAA (2) CAGCAATAAA CAGCATAAAA GGCCTCTTCT TGGCCACTGG (4) 32.3 0.0323 P8 GC+1d culture AAACATAGTT CAGCAATAAA CAGCAATATT CAGGCAAGAC TGGCCACTGG (4) 13.5 0.0135 P8 GC+SHH+1d culture CAGCAAAAAA (2) CAGCAATAAA CAGCAATATT GGCCTCTTCT 14.1 0.0141 3T3 fibroblasts GAGACGCCAA GGCCTCTTCT 21 0.021 E15 cortex AGTGGCCCAG GGCCTCTTCT 39.6 0.0396 P1 cortex AAACATAGTT AGTGGCCCAG CAGCAATAAA 13.5 0.0135 Hypothalamus CAGCAAAAAA (2) CAGCAATAAA CAGCAATATT CAGGCAAGAC GAGACGCCAA GGCCTCTTCT TGGCCACTGG (4) 27.1 0.0271 E12.5 retina CAGCAAAAAA (2) CAGCAATAAA CAGGCAAGAC TGTGCACATA (3) 9.5 0.0095 E14.5 retina CAGCAAAAAA (2) CAGCAATAAA GGCCTCTTCT 16.4 0.0164 E16.5 retina CAGCAATAAA GGAGGAGAGA 10.9 0.0109 E18.5 retina CAGCAAAAAA (2) CAGCAATAAA GGACTCCTGG GGCCTCTTCT 32.7 0.0327 P0.5 retina AAACATAGTT CAGCAATAAA GGCCTCTTCT TGGCCACTGG (4) 17.7 0.0177 P2.5 retina AAACATAGTT CAGCAAAAAA (2) CAGCAATAAA GAGACGCCAA TGGCCACTGG (4) 23 0.023 P4.5 retina AAACATAGTT CAGCAATAAA 19.8 0.0198 P6.5 retina AAACATAGTT CAGCAAAAAA (2) CAGCAATAAA GGACTCCTGG GGAGGAGAGA TGGCCACTGG (4) 36.7 0.0367 P10.5 crx- retina AGTGGCCCAG CAGCAAAAAA (2) CAGCAATAAA CAGGCAAGAC GGACTCCTGG TGGCCACTGG (4) TGTGCACATA (3) 20.7 0.0207 P10.5 crx+ retina CAGCAAAAAA (2) CAGCAATAAA GGAGGAGAGA 17.3 0.0173 Adult retinal CAGCAATAAA CAGGCAAGAC 14.8 0.0148 ONL CAGCAATAAA CAGGCAAGAC TGTGCACATA (3) 13.3 0.0133