Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29196	Cyc1	cytochrome c-1	15		66445
Gene Ontology	electron transport | electron transporter activity | heme binding | integral to membrane | mitochondrial electron transport chain | mitochondrion | mitochondrion | oxidative phosphorylation
Human Homolog	CYC1[cytochrome c-1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 60 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGGCCAGGGA (2) GCCTTCTCAG GCTCCTCCCA (3) 16.3 0.0163 Cb medulloblastoma GCATAGGTCA GCCTTCTCAG GCTCCTCCCA (3) 50.8 0.0508 P8 GC+1d culture CGGCCAGGGA (2) CTGTGGAAGG GCCTTCTCAG GCTCCTCCCA (3) 34.1 0.0341 P8 GC+SHH+1d culture GCCTTCTCAG 21.1 0.0211 3T3 fibroblasts GCCTTCTCAG 3.5 0.0035 E15 cortex GCCTTCTCAG GCTCCTCCCA (3) 24.7 0.0247 P1 cortex GCCTTCTCAG 22.7 0.0227 Hypothalamus AAGCGGCATA CGGCCAGGGA (2) GCCTTCTCAG GCTCCTCCCA (3) GTGGTGAGGA 23.5 0.0235 E12.5 retina CTGTGGAAGG GCCTTCTCAG GTAATGTGGA 13.2 0.0132 E14.5 retina GATATGTGGG GCCTTCTCAG GCTCCTCCCA (3) GTAATGTGGA 18.2 0.0182 E16.5 retina AAGCGGCATA GCCTTCTCAG GCTCCTCCCA (3) 30.8 0.0308 E18.5 retina AAGCGGCATA GCCTTCTCAG GCCTTTTCAG GTAATGTGGA 32.7 0.0327 P0.5 retina GCCTTCTCAG GCTCCTCCCA (3) 31.4 0.0314 P2.5 retina GCATAGGTCA GCCTTCTCAG GTAATGTGGA 30 0.03 P4.5 retina GCATAGGTCA GCCTTCTCAG GCCTTTTCAG GCTCCTCCCA (3) 29.8 0.0298 P6.5 retina GCCTTCTCAG GCCTTTTCAG GCTCCTCCCA (3) 33.3 0.0333 P10.5 crx- retina GCCTTCTCAG GCCTTTTCAG GCTCCTCCCA (3) 46.5 0.0465 P10.5 crx+ retina GCCTTCTCAG GCCTTTTCAG GCTCCTCCCA (3) GTAATGTGGA GTGGTGAGGA 34.5 0.0345 Adult retinal CTGTGGAAGG GCCTTCTCAG GTAATGTGGA 29.7 0.0297 ONL GATATGTGGG GCCTTCTCAG GTAATGTGGA 28.7 0.0287