Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.292208	Hdgf	hepatoma-derived growth factor	3	3 61.8 cM	15191
Gene Ontology	cell growth and/or maintenance | extracellular space | growth factor activity | heparin binding | nucleus
Human Homolog	HDGF[hepatoma-derived growth factor (high-mobility group protein 1-like)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 110 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GATGGCATCG (4) 13.1 0.0131 P8 Cb GC CCCCTCTTCC (3) 8.2 0.0082 P8 Cb GC AGGGTGACTG (2) 3.3 0.0033 P8 Cb GC AGACGGCATT (3) 1.6 0.0016 P8 Cb GC AGGAGGAGGA (16) 1.6 0.0016 P8 Cb GC AGGCCAGCCT (3) 1.6 0.0016 P8 Cb GC GACCCCCCCC (14) 1.6 0.0016 P8 Cb GC GGGCTTTGAT (6) 1.6 0.0016 P8 Cb GC TCTCCAGCCC (3) 1.6 0.0016 Cb medulloblastoma AGATCCTGTC (4) 6.9 0.0069 Cb medulloblastoma CCCCTCTTCC (3) 2.3 0.0023 Cb medulloblastoma GACCCCCCCC (14) 2.3 0.0023 Cb medulloblastoma GATGGCATCG (4) 2.3 0.0023 Cb medulloblastoma TAAGAAACCA (2) 2.3 0.0023 Cb medulloblastoma TCTCCAGCCC (3) 2.3 0.0023 P8 GC+1d culture GATGGCATCG (4) 8 0.008 P8 GC+1d culture GACCCCCCCC (14) 5.7 0.0057 P8 GC+1d culture AGGGTGACTG (2) 4.6 0.0046 P8 GC+1d culture CCCCTCTTCC (3) 4.6 0.0046 P8 GC+1d culture AGATCCTGTC (4) 1.1 0.0011 P8 GC+1d culture GTCCTGGAAA (8) 1.1 0.0011 P8 GC+1d culture TCTCCAGCCC (3) 1.1 0.0011 P8 GC+SHH+1d culture CCCCTCTTCC (3) 12.9 0.0129 P8 GC+SHH+1d culture GACCCCCCCC (14) 8.2 0.0082 P8 GC+SHH+1d culture GATGGCATCG (4) 7 0.007 P8 GC+SHH+1d culture AGGGTGACTG (2) 3.5 0.0035 P8 GC+SHH+1d culture AGACGGCATT (3) 2.3 0.0023 P8 GC+SHH+1d culture TAAGAAACCA (2) 2.3 0.0023 P8 GC+SHH+1d culture TCCAAAGAGA (4) 2.3 0.0023 P8 GC+SHH+1d culture AGGAGGAGGA (16) 1.2 0.0012 P8 GC+SHH+1d culture AGGGTGACGG 1.2 0.0012 P8 GC+SHH+1d culture GCCTGCAAAC (2) 1.2 0.0012 3T3 fibroblasts GATGGCATCG (4) 17.5 0.0175 3T3 fibroblasts CCCCTCTTCC (3) 14 0.014 E15 cortex GACCCCCCCC (14) 34.6 0.0346 E15 cortex CCCCTCTTCC (3) 19.8 0.0198 E15 cortex GATGGCATCG (4) 9.9 0.0099 E15 cortex AGGCCAGCCT (3) 4.9 0.0049 P1 cortex GATGGCATCG (4) 9.1 0.0091 P1 cortex GACCCCCCCC (14) 4.5 0.0045 P1 cortex TCCAAAGAGA (4) 4.5 0.0045 Hypothalamus TAAGAAACCA (2) 10.9 0.0109 Hypothalamus CCCCTCTTCC (3) 7.2 0.0072 Hypothalamus GATGGCATCG (4) 3.6 0.0036 Hypothalamus GCCTGCAAAC (2) 1.8 0.0018 Hypothalamus TCCAAAGAGA (4) 1.8 0.0018 E12.5 retina CCCCTCTTCC (3) 3.8 0.0038 E12.5 retina GATGGCATCG (4) 3.8 0.0038 E12.5 retina AGATCCTGTC (4) 1.9 0.0019 E12.5 retina TCCAAAGAGA (4) 1.9 0.0019 E12.5 retina TCTCCAGCCC (3) 1.9 0.0019 E14.5 retina CCCCTCTTCC (3) 3.6 0.0036 E14.5 retina GATGGCATCG (4) 3.6 0.0036 E14.5 retina AGACGGCATT (3) 1.8 0.0018 E14.5 retina AGGCCAGCCT (3) 1.8 0.0018 E14.5 retina AGGGTGACGG 1.8 0.0018 E14.5 retina AGGGTGACTG (2) 1.8 0.0018 E16.5 retina AGGGTGACTG (2) 3.6 0.0036 E16.5 retina CCCCTCTTCC (3) 3.6 0.0036 E16.5 retina AGAGCCTGTA (2) 1.8 0.0018 E16.5 retina AGATCCTGTC (4) 1.8 0.0018 E16.5 retina AGGGTGACGG 1.8 0.0018 E16.5 retina GATGGCATCG (4) 1.8 0.0018 E16.5 retina GCCTGCAAAC (2) 1.8 0.0018 E16.5 retina GTCCTGGAAA (8) 1.8 0.0018 E16.5 retina TAAGAAACCA (2) 1.8 0.0018 E16.5 retina TCTCCAGCCC (3) 1.8 0.0018 E18.5 retina CCCCTCTTCC (3) 12.7 0.0127 E18.5 retina GGGCTTTGAT (6) 3.6 0.0036 E18.5 retina AGACGGCATT (3) 1.8 0.0018 E18.5 retina AGATCCTGTC (4) 1.8 0.0018 E18.5 retina GACCCCCCCC (14) 1.8 0.0018 E18.5 retina TCCAAAGAGA (4) 1.8 0.0018 P0.5 retina GATGGCATCG (4) 19.6 0.0196 P0.5 retina CCCCTCTTCC (3) 9.8 0.0098 P0.5 retina TCCAAAGAGA (4) 3.9 0.0039 P0.5 retina AGAGCCTGTA (2) 2 0.002 P0.5 retina AGGAGGAGGA (16) 2 0.002 P2.5 retina CCCCTCTTCC (3) 8.8 0.0088 P2.5 retina GATGGCATCG (4) 7 0.007 P2.5 retina TAAGAAACCA (2) 5.3 0.0053 P2.5 retina GCCTGCAAAC (2) 3.5 0.0035 P2.5 retina GGGCTTTGAT (6) 1.8 0.0018 P2.5 retina TCTCCAGCCC (3) 1.8 0.0018 P4.5 retina CCCCTCTTCC (3) 7.9 0.0079 P4.5 retina TCCAAAGAGA (4) 4 0.004 P4.5 retina AGAGCCTGTA (2) 2 0.002 P4.5 retina AGATCCTGTC (4) 2 0.002 P4.5 retina AGGCCAGCCT (3) 2 0.002 P4.5 retina AGGGTGACTG (2) 2 0.002 P4.5 retina TAAGAAACCA (2) 2 0.002 P4.5 retina TCTCCAGCCC (3) 2 0.002 P6.5 retina CCCCTCTTCC (3) 6.7 0.0067 P6.5 retina AGATCCTGTC (4) 1.7 0.0017 P6.5 retina AGGGTGACGG 1.7 0.0017 P6.5 retina AGGGTGACTG (2) 1.7 0.0017 P6.5 retina TCTCCAGCCC (3) 1.7 0.0017 P10.5 crx- retina CCCCTCTTCC (3) 3.7 0.0037 P10.5 crx- retina GATGGCATCG (4) 3.7 0.0037 P10.5 crx- retina GACCCCCCCC (14) 1.9 0.0019 P10.5 crx- retina TCTCCAGCCC (3) 1.9 0.0019 P10.5 crx+ retina AGGAGGAGGA (16) 3.8 0.0038 Adult retinal GATGGCATCG (4) 7.4 0.0074 Adult retinal GACCCCCCCC (14) 1.9 0.0019 Adult retinal GCCTGCAAAC (2) 1.9 0.0019 Adult retinal GTCCTGGAAA (8) 1.9 0.0019 Adult retinal TCTCCAGCCC (3) 1.9 0.0019 ONL AGATCCTGTC (4) 5.7 0.0057 ONL CCCCTCTTCC (3) 1.9 0.0019 ONL TCTCCAGCCC (3) 1.9 0.0019