Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.292208	Hdgf	hepatoma-derived growth factor	3	3 61.8 cM	15191
Gene Ontology	cell growth and/or maintenance | extracellular space | growth factor activity | heparin binding | nucleus
Human Homolog	HDGF[hepatoma-derived growth factor (high-mobility group protein 1-like)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 110 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGACGGCATT (3) AGGAGGAGGA (3) AGGCCAGCCT (2) AGGGTGACTG CCCCTCTTCC (2) GACCCCCCCC GATGGCATCG GGGCTTTGAT TCTCCAGCCC 34.2 0.0342 Cb medulloblastoma AGATCCTGTC CCCCTCTTCC (2) GACCCCCCCC GATGGCATCG TAAGAAACCA (2) TCTCCAGCCC 18.4 0.0184 P8 GC+1d culture AGATCCTGTC AGGGTGACTG CCCCTCTTCC (2) GACCCCCCCC GATGGCATCG GTCCTGGAAA (4) TCTCCAGCCC 26.2 0.0262 P8 GC+SHH+1d culture AGACGGCATT (3) AGGAGGAGGA (3) AGGGTGACGG AGGGTGACTG CCCCTCTTCC (2) GACCCCCCCC GATGGCATCG GCCTGCAAAC TAAGAAACCA (2) TCCAAAGAGA (4) 42.1 0.0421 3T3 fibroblasts CCCCTCTTCC (2) GATGGCATCG 31.5 0.0315 E15 cortex AGGCCAGCCT (2) CCCCTCTTCC (2) GACCCCCCCC GATGGCATCG 69.2 0.0692 P1 cortex GACCCCCCCC GATGGCATCG TCCAAAGAGA (4) 18.1 0.0181 Hypothalamus CCCCTCTTCC (2) GATGGCATCG GCCTGCAAAC TAAGAAACCA (2) TCCAAAGAGA (4) 25.3 0.0253 E12.5 retina AGATCCTGTC CCCCTCTTCC (2) GATGGCATCG TCCAAAGAGA (4) TCTCCAGCCC 13.3 0.0133 E14.5 retina AGACGGCATT (3) AGGCCAGCCT (2) AGGGTGACGG AGGGTGACTG CCCCTCTTCC (2) GATGGCATCG 14.4 0.0144 E16.5 retina AGAGCCTGTA AGATCCTGTC AGGGTGACGG AGGGTGACTG CCCCTCTTCC (2) GATGGCATCG GCCTGCAAAC GTCCTGGAAA (4) TAAGAAACCA (2) TCTCCAGCCC 21.6 0.0216 E18.5 retina AGACGGCATT (3) AGATCCTGTC CCCCTCTTCC (2) GACCCCCCCC GGGCTTTGAT TCCAAAGAGA (4) 23.5 0.0235 P0.5 retina AGAGCCTGTA AGGAGGAGGA (3) CCCCTCTTCC (2) GATGGCATCG TCCAAAGAGA (4) 37.3 0.0373 P2.5 retina CCCCTCTTCC (2) GATGGCATCG GCCTGCAAAC GGGCTTTGAT TAAGAAACCA (2) TCTCCAGCCC 28.2 0.0282 P4.5 retina AGAGCCTGTA AGATCCTGTC AGGCCAGCCT (2) AGGGTGACTG CCCCTCTTCC (2) TAAGAAACCA (2) TCCAAAGAGA (4) TCTCCAGCCC 23.9 0.0239 P6.5 retina AGATCCTGTC AGGGTGACGG AGGGTGACTG CCCCTCTTCC (2) TCTCCAGCCC 13.5 0.0135 P10.5 crx- retina CCCCTCTTCC (2) GACCCCCCCC GATGGCATCG TCTCCAGCCC 11.2 0.0112 P10.5 crx+ retina AGGAGGAGGA (3) 3.8 0.0038 Adult retinal GACCCCCCCC GATGGCATCG GCCTGCAAAC GTCCTGGAAA (4) TCTCCAGCCC 15 0.015 ONL AGATCCTGTC CCCCTCTTCC (2) TCTCCAGCCC 9.5 0.0095