Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.29397
AA517739
expressed sequence AA517739
16
224432
Human Homolog
SFRS15[splicing factor, arginine/serine-rich 15]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 50 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTAAAAAAAA (
80
)
13.1
0.0131
P8 Cb GC
GCCTCCCCTT (
4
)
6.5
0.0065
Cb medulloblastoma
TTAAAAAAAA (
80
)
53.2
0.0532
Cb medulloblastoma
GCCCCCTTGT (
3
)
2.3
0.0023
P8 GC+1d culture
TTAAAAAAAA (
80
)
28.5
0.0285
P8 GC+1d culture
GCCTCCCCTT (
4
)
20.5
0.0205
P8 GC+SHH+1d culture
TTAAAAAAAA (
80
)
34
0.034
P8 GC+SHH+1d culture
GCCTCCCCTT (
4
)
24.6
0.0246
P8 GC+SHH+1d culture
AGGTGTACAG
(
2
)
2.3
0.0023
3T3 fibroblasts
GCCTCCCCTT (
4
)
7
0.007
E15 cortex
GCCTCCCCTT (
4
)
14.8
0.0148
E15 cortex
TTAAAAAAAA (
80
)
4.9
0.0049
P1 cortex
TTAAAAAAAA (
80
)
13.6
0.0136
P1 cortex
GCCTCCCCTT (
4
)
4.5
0.0045
Hypothalamus
TTAAAAAAAA (
80
)
19.9
0.0199
Hypothalamus
GCCCCCTTGT (
3
)
3.6
0.0036
E12.5 retina
TTAAAAAAAA (
80
)
11.3
0.0113
E12.5 retina
GCCTCCCCTT (
4
)
3.8
0.0038
E12.5 retina
AGGTGTACAG
(
2
)
1.9
0.0019
E14.5 retina
TTAAAAAAAA (
80
)
16.4
0.0164
E14.5 retina
AGGTGTACAG
(
2
)
1.8
0.0018
E16.5 retina
TTAAAAAAAA (
80
)
16.3
0.0163
E16.5 retina
GCCTCCCCTT (
4
)
7.2
0.0072
E18.5 retina
TTAAAAAAAA (
80
)
50.9
0.0509
E18.5 retina
GCAGCAGGAA (
3
)
1.8
0.0018
E18.5 retina
GCCCCCTTGT (
3
)
1.8
0.0018
P0.5 retina
TTAAAAAAAA (
80
)
17.7
0.0177
P0.5 retina
GCCTCCCCTT (
4
)
9.8
0.0098
P0.5 retina
GCAGCAGGAA (
3
)
3.9
0.0039
P0.5 retina
AGGTGTACAG
(
2
)
2
0.002
P2.5 retina
TTAAAAAAAA (
80
)
40.5
0.0405
P2.5 retina
AGGTGTACAG
(
2
)
1.8
0.0018
P4.5 retina
TTAAAAAAAA (
80
)
47.6
0.0476
P4.5 retina
GCCTCCCCTT (
4
)
4
0.004
P6.5 retina
TTAAAAAAAA (
80
)
16.7
0.0167
P6.5 retina
GCCTCCCCTT (
4
)
5
0.005
P6.5 retina
GCAGCAGGAA (
3
)
1.7
0.0017
P10.5 crx- retina
TTAAAAAAAA (
80
)
13
0.013
P10.5 crx- retina
AGGTGTACAG
(
2
)
1.9
0.0019
P10.5 crx- retina
GCAGCAGGAA (
3
)
1.9
0.0019
P10.5 crx- retina
GCCCCCTTGT (
3
)
1.9
0.0019
P10.5 crx- retina
GCCTCCCCTT (
4
)
1.9
0.0019
P10.5 crx+ retina
GCCCCCTTGT (
3
)
5.8
0.0058
P10.5 crx+ retina
TTAAAAAAAA (
80
)
5.8
0.0058
P10.5 crx+ retina
AGGTGTACAG
(
2
)
1.9
0.0019
P10.5 crx+ retina
GCCTCCCCTT (
4
)
1.9
0.0019
Adult retinal
TTAAAAAAAA (
80
)
7.4
0.0074
Adult retinal
GCCCCCTTGT (
3
)
3.7
0.0037
ONL
TTAAAAAAAA (
80
)
7.7
0.0077
ONL
AGGTGTACAG
(
2
)
1.9
0.0019
