Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.294166	Snx10	sorting nexin 10	6		71982
Gene Ontology	intracellular protein transport | intracellular signaling cascade | protein transport | protein transporter activity | transport
Human Homolog	SNX10[sorting nexin 10]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 99 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAGCAAAAA (4) AAAGCAAAGC AAAGCCAAGC (2) TGGTTGCTGA (3) TGTGTCAACC (2) 39.2 0.0392 Cb medulloblastoma AAAGCAAAAA (4) AAAGCAAAAC (2) AAAGCAAAGC TGGTTGCTGA (3) TGTGTCAACC (2) 161.9 0.1619 P8 GC+1d culture AAAGCAAAAA (4) AAAGCAAAGC AGCTTCCAGT ATCACTTCCT (2) CTACTTCTTG (2) TGTGTCAACC (2) 42.2 0.0422 P8 GC+SHH+1d culture AAAGCAAAGC ATCACTTCCT (2) TGGTTGCTGA (3) TGTGTCAACC (2) 43.3 0.0433 3T3 fibroblasts TGGTTGCTGA (3) TGTGTCAACC (2) 24.5 0.0245 E15 cortex AAAGCAAAAC (2) TGGTTGCTGA (3) TGTGTCAACC (2) 24.6 0.0246 P1 cortex AAAGCAAAGC TGTGTCAACC (2) 31.8 0.0318 Hypothalamus AAAGCAAAGC AAAGCCAAGC (2) ATGACTGATG CTACTTCTTG (2) TGGTTGCTGA (3) TGTGTCAACC (2) 108.6 0.1086 E12.5 retina AAAGCAAAAA (4) AAAGCAAAGC GGTCACTTTC TGGTTGCTGA (3) TGTGTCAACC (2) 32 0.032 E14.5 retina AAAGCAAAAA (4) AAAGCAAAGC GGTCACTTTC TGGTTGCTGA (3) TGTGTCAACC (2) 54.7 0.0547 E16.5 retina AAAGCAAAAA (4) AAAGCAAAGC AAAGCCAAGC (2) CTACTTCTTG (2) TGGTTGCTGA (3) TGTGTCAACC (2) 54.3 0.0543 E18.5 retina AAAGCAAAAA (4) AAAGCAAAGC GGTCACTTTC TGGTTGCTGA (3) TGTGTCAACC (2) 34.5 0.0345 P0.5 retina AAAGCAAAGC CTACTTCTTG (2) TGGTTGCTGA (3) TGTGTCAACC (2) 39.4 0.0394 P2.5 retina AAAGCAAAGC ATGACTGATG GGTCACTTTC TGGTTGCTGA (3) TGTGTCAACC (2) 40.6 0.0406 P4.5 retina AAAGCAAAAA (4) AAAGCAAAAC (2) AAAGCAAAGC AGCTTCCAGT CTACTTCTTG (2) GGTCACTTTC TGGTTGCTGA (3) TGTGTCAACC (2) 71.4 0.0714 P6.5 retina AAAGCAAAAA (4) AAAGCAAAGC CCACTGTCAG TGGTTGCTGA (3) TGTGTCAACC (2) 66.6 0.0666 P10.5 crx- retina AAAGCAAAAA (4) AAAGCAAAGC TGGTTGCTGA (3) TGTGTCAACC (2) 91.1 0.0911 P10.5 crx+ retina AAAGCAAAAA (4) AAAGCAAAGC AGCTTCCAGT CCACTGTCAG GGTCACTTTC TGGTTGCTGA (3) TGTGTCAACC (2) 103.7 0.1037 Adult retinal AAAGCAAAAA (4) AAAGCAAAGC CCACTGTCAG TGGTTGCTGA (3) TGTGTCAACC (2) 50.1 0.0501 ONL AAAGCAAAAA (4) AAAGCAAAGC CCACTGTCAG CTACTTCTTG (2) GGTCACTTTC TGGTTGCTGA (3) TGTGTCAACC (2) 53.7 0.0537