Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.2965 Rhorhodopsin 6  6 E3 (6 51.5 cM)  212541 
 Gene Ontology G-protein coupled photoreceptor activity | G-protein coupled receptor activity | G-protein coupled receptor protein signaling pathway | integral to membrane | perception of light | photoreceptor outer segment | phototransduction | receptor activity | rhodopsin-like receptor activity | vision
 Human Homolog RHO[rhodopsin (opsin 2, rod pigment) (retinitis pigmentosa 4, autosomal dominant)]
 Clusters 
   Neighbors    

Total 12 In Situ Hybridization Images

Images -- Click to Enlarge



SAGE Tags

Total 83 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCCCCAGTTCAC (3)
1.60.0016
Cb medulloblastomaGACAAAGTGT (2)
GCCATCTTCT (2)
GGGACAGAGG (2)
6.90.0069
P8 GC+SHH+1d cultureGACAAAGTGT (2)
5.90.0059
3T3 fibroblastsGACAAAGTGT (2)
GCCATCTTCT (2)
70.007
P1 cortexGGGGACAGAG (2)
4.50.0045
HypothalamusGCCATCTTCT (2)
GGGACAGAGG (2)
TCTGGCTGGA (3)
7.20.0072
E12.5 retinaGACAAAGTGT (2)
1.90.0019
E14.5 retinaCAGGCTCCCT
GGGACAGAGG (2)
TCTGGCTGGA (3)
5.40.0054
E16.5 retinaACAAGTGTCC
1.80.0018
E18.5 retinaCAGGCTCCCT
CCCAGTTCAC (3)
3.60.0036
P0.5 retinaAAACCCCACT
AGCTGGGACC
GACAAAGTGT (2)
GGGACAGAGG (2)
13.90.0139
P4.5 retinaAAACCCCACT
ACAAGTGTCC
AGCTGGGACC
GACAAAGTGT (2)
80.008
P6.5 retinaAAACCCCACT
AATTCATTAA (2)
ACAAGTGTCC
AGCTGGGACC
GACAAAGTGT (2)
GGGACAGAGG (2)
TCTGGCTGGA (3)
58.30.0583
P10.5 crx- retinaAAACCCCACT
ACAAGTGTCC
AGCTGGGACC
GACAAAGTGT (2)
GGGACAGAGG (2)
GGGGACAGAG (2)
TCTGGCTGGA (3)
57.60.0576
P10.5 crx+ retinaAAACCCCACT
AATTCATTAA (2)
ACAAGTGTCC
AGCTGGGACC
CAGAGTTGGG
CAGGCTCCCT
GACAAAGTGT (2)
GATCCAGTTC
GGGACAGAGG (2)
GGGGACAGAG (2)
TCTGGCTGGA (3)
TTGAACAAGC
613.20.6132
Adult retinalAAACCCCACT
AATTCATTAA (2)
ACAAGTGTCC
ACTCTGCCAG
AGCTGGGACC
CAGAGTTGGG
CCCAGTTCAC (3)
GACAAAGTGT (2)
GATCCAGTTC
GGGACAGAGG (2)
GGGGACAGAG (2)
GTCTTCGGAG (2)
TCTCTCAGCC
TCTGGCTGGA (3)
TTGAACAAGC
1938.61.9386
ONLAAACCCCACT
AATTCATTAA (2)
ACAAGTGTCC
ACTCTGCCAG
AGCTGGGACC
CAGAGTTGGG
CAGGCTCCCT
CCCAGTTCAC (3)
GACAAAGTGT (2)
GATCCAGTTC
GGGACAGAGG (2)
GGGGACAGAG (2)
GTCTTCGGAG (2)
TCTCTCAGCC
TCTGGCTGGA (3)
TTGAACAAGC
2258.12.2581