Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29897	BC059730	cDNA sequence BC059730			407785
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 113 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC AAAAACAAAA (12) 1.6 0.0016 P8 Cb GC GTGTACATAA (3) 1.6 0.0016 P8 Cb GC TGGCTACTGC 1.6 0.0016 P8 Cb GC TGGCTACTGG (7) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma AAAAACAAAA (12) 37 0.037 Cb medulloblastoma TGGCTACTGC 9.2 0.0092 Cb medulloblastoma CAGGTTCTCC (2) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture AAAAACAAAA (12) 8 0.008 P8 GC+1d culture TGGCTACTGC 3.4 0.0034 P8 GC+1d culture TGGCTACTGG (7) 3.4 0.0034 P8 GC+1d culture CAGGTTCTCC (2) 2.3 0.0023 P8 GC+1d culture AAAAATAAAG (7) 1.1 0.0011 P8 GC+1d culture AATAAAATTT (3) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture AAAAACAAAA (12) 14.1 0.0141 P8 GC+SHH+1d culture TGGCTACTGG (7) 9.4 0.0094 P8 GC+SHH+1d culture AATAAAATTT (3) 1.2 0.0012 P8 GC+SHH+1d culture GTGTACATAA (3) 1.2 0.0012 P8 GC+SHH+1d culture TGGCTACTGC 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts TGGCTACTGC 3.5 0.0035 3T3 fibroblasts TGGCTACTGG (7) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex AAAAACAAAA (12) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex TGGCTACTGC 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex AAAAACAAAA (12) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus TGGCTACTGC 10.9 0.0109 Hypothalamus TCCCCGTTTT 5.4 0.0054 Hypothalamus AAAAACAAAA (12) 3.6 0.0036 Hypothalamus AAAAATAAAG (7) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina AAAAACAAAA (12) 13.1 0.0131 E12.5 retina AAAAATAAAG (7) 1.9 0.0019 E12.5 retina AATAAAATTT (3) 1.9 0.0019 E12.5 retina TGGCTACTGC 1.9 0.0019 E12.5 retina TGGCTACTGG (7) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina AAAAACAAAA (12) 5.5 0.0055 E14.5 retina TGGCTACTGC 5.5 0.0055 E14.5 retina AAAAATAAAG (7) 1.8 0.0018 E14.5 retina TGGCTACTGG (7) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina TGGCTACTGG (7) 7.2 0.0072 E16.5 retina TGGCTACTGC 3.6 0.0036 E16.5 retina AATAAAATTT (3) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina TGGCTACTGC 5.5 0.0055 E18.5 retina AAAAACAAAA (12) 3.6 0.0036 E18.5 retina TGGCTACTGG (7) 3.6 0.0036 E18.5 retina AATAAAATTT (3) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina TGGCTACTGG (7) 5.9 0.0059 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina TGGCTACTGC 3.9 0.0039 P0.5 retina AAAAACAAAA (12) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina AAAAACAAAA (12) 3.5 0.0035 P2.5 retina AATAAAATTT (3) 3.5 0.0035 P2.5 retina CAGGTTCTCC (2) 3.5 0.0035 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TGGCTACTGC 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina AAAAACAAAA (12) 4 0.004 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TGGCTACTGC 3.3 0.0033 P6.5 retina AAAAATAAAG (7) 1.7 0.0017 P6.5 retina CAGGTTCTCC (2) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina TGGCTACTGC 13 0.013 P10.5 crx- retina CAGGTTCTCC (2) 9.3 0.0093 P10.5 crx- retina AAAAACAAAA (12) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina TGGCTACTGC 9.6 0.0096 P10.5 crx+ retina GTGTACATAA (3) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal CAGGTTCTCC (2) 5.6 0.0056 Adult retinal TGGCTACTGC 5.6 0.0056 Adult retinal AAAAACAAAA (12) 1.9 0.0019 Adult retinal AAAAATAAAG (7) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL GTCATAGCTG (590) 5.7 0.0057 ONL AAAAACAAAA (12) 3.8 0.0038 ONL TGGCTACTGC 1.9 0.0019 ONL TGGCTACTGG (7) 1.9 0.0019