Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29933	2410003B16Rik	RIKEN cDNA 2410003B16 gene	8		72333
Human Homolog	KIAA0992[palladin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 88 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAATTTAAA (4) 11.4 0.0114 P8 Cb GC GCAGTTTAAA (3) 3.3 0.0033 P8 Cb GC TGGGTGCTAC (2) 3.3 0.0033 P8 Cb GC CCAGAAGGCC (3) 1.6 0.0016 P8 Cb GC GGAAGTCTTC (2) 1.6 0.0016 Cb medulloblastoma TGGGAGTGTG (3) 6.9 0.0069 Cb medulloblastoma CCAGAAGGCC (3) 4.6 0.0046 Cb medulloblastoma GCAGTTTAAA (3) 4.6 0.0046 Cb medulloblastoma GAAATTTAAA (4) 2.3 0.0023 Cb medulloblastoma TGGGTGCTAC (2) 2.3 0.0023 P8 GC+1d culture GAAATTTAAA (4) 36.5 0.0365 P8 GC+1d culture GCAGTTTAAA (3) 6.8 0.0068 P8 GC+1d culture CCAGAAGGCC (3) 3.4 0.0034 P8 GC+1d culture GCCCTTTCTC (2) 1.1 0.0011 P8 GC+SHH+1d culture GAAATTTAAA (4) 59.7 0.0597 P8 GC+SHH+1d culture GCAGTTTAAA (3) 8.2 0.0082 P8 GC+SHH+1d culture TGGGTGCTAC (2) 5.9 0.0059 P8 GC+SHH+1d culture CCAGAAGGCC (3) 3.5 0.0035 P8 GC+SHH+1d culture CAAAACATAT (2) 2.3 0.0023 P8 GC+SHH+1d culture GGAAGTCTTC (2) 1.2 0.0012 3T3 fibroblasts CCAGAAGGCC (3) 21 0.021 3T3 fibroblasts GCTACATCTG (2) 14 0.014 3T3 fibroblasts GAAATTTAAA (4) 7 0.007 3T3 fibroblasts GGCCTATCTC (4) 7 0.007 3T3 fibroblasts TGGGTGCTAC (2) 3.5 0.0035 E15 cortex GAAATTTAAA (4) 44.5 0.0445 E15 cortex CCAGAAGGCC (3) 9.9 0.0099 E15 cortex TGGGTGCTAC (2) 4.9 0.0049 P1 cortex GAAATTTAAA (4) 40.9 0.0409 P1 cortex CCAGAAGGGG (5) 4.5 0.0045 P1 cortex GCAGTTTAAA (3) 4.5 0.0045 Hypothalamus GAAATTTAAA (4) 5.4 0.0054 Hypothalamus AAAACCTGAA (10) 1.8 0.0018 Hypothalamus CCAGAAGGCC (3) 1.8 0.0018 E12.5 retina GAAATTTAAA (4) 78.8 0.0788 E12.5 retina GCAGTTTAAA (3) 11.3 0.0113 E12.5 retina CCAGAAGGCC (3) 3.8 0.0038 E14.5 retina GAAATTTAAA (4) 18.2 0.0182 E14.5 retina GCAGTTTAAA (3) 5.5 0.0055 E14.5 retina AAAACCTGAA (10) 1.8 0.0018 E14.5 retina GCCCTTTCTC (2) 1.8 0.0018 E14.5 retina TGGGTGCTAC (2) 1.8 0.0018 E16.5 retina GAAATTTAAA (4) 27.2 0.0272 E16.5 retina GCAGTTTAAA (3) 3.6 0.0036 E16.5 retina GCTACATCTG (2) 3.6 0.0036 E16.5 retina GCCCTTTCTC (2) 1.8 0.0018 E18.5 retina GAAATTTAAA (4) 52.8 0.0528 E18.5 retina GCAGTTTAAA (3) 3.6 0.0036 E18.5 retina TGGGTGCTAC (2) 3.6 0.0036 P0.5 retina GAAATTTAAA (4) 39.3 0.0393 P0.5 retina CCAGAAGGCC (3) 5.9 0.0059 P0.5 retina AAAACCTGAA (10) 2 0.002 P0.5 retina CCAGAAGGGG (5) 2 0.002 P0.5 retina GGAAGTCTTC (2) 2 0.002 P2.5 retina GAAATTTAAA (4) 68.6 0.0686 P2.5 retina GGCCTATCTC (4) 7 0.007 P2.5 retina TGGGTGCTAC (2) 5.3 0.0053 P2.5 retina GCCCTTTCTC (2) 1.8 0.0018 P2.5 retina GCTACATCTG (2) 1.8 0.0018 P4.5 retina GAAATTTAAA (4) 43.6 0.0436 P4.5 retina TGGGTGCTAC (2) 5.9 0.0059 P4.5 retina GCAGTTTAAA (3) 4 0.004 P4.5 retina CCAGAAGGCC (3) 2 0.002 P4.5 retina CCAGAAGGGG (5) 2 0.002 P4.5 retina GCCCTTTCTC (2) 2 0.002 P6.5 retina GAAATTTAAA (4) 16.7 0.0167 P6.5 retina CAAAACATAT (2) 1.7 0.0017 P6.5 retina CCAGAAGGGG (5) 1.7 0.0017 P6.5 retina GCAGTTTAAA (3) 1.7 0.0017 P6.5 retina GCCCTTTCTC (2) 1.7 0.0017 P6.5 retina TGGGTGCTAC (2) 1.7 0.0017 P10.5 crx- retina CCAGAAGGCC (3) 7.4 0.0074 P10.5 crx- retina GAAATTTAAA (4) 5.6 0.0056 P10.5 crx- retina GCAGTTTAAA (3) 5.6 0.0056 P10.5 crx- retina GGCCTATCTC (4) 1.9 0.0019 P10.5 crx+ retina GAAATTTAAA (4) 11.5 0.0115 P10.5 crx+ retina GCAGTTTAAA (3) 11.5 0.0115 P10.5 crx+ retina CAAAACATAT (2) 1.9 0.0019 P10.5 crx+ retina CCAGAAGGCC (3) 1.9 0.0019 P10.5 crx+ retina CCAGAAGGGG (5) 1.9 0.0019 P10.5 crx+ retina GCCCTTTCTC (2) 1.9 0.0019 P10.5 crx+ retina TGGGTGCTAC (2) 1.9 0.0019 Adult retinal GAAATTTAAA (4) 3.7 0.0037 Adult retinal TGGGTGCTAC (2) 3.7 0.0037 Adult retinal CCAGAAGGGG (5) 1.9 0.0019 ONL GAAATTTAAA (4) 7.7 0.0077 ONL GCAGTTTAAA (3) 3.8 0.0038 ONL TGGGTGCTAC (2) 3.8 0.0038