Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29933	2410003B16Rik	RIKEN cDNA 2410003B16 gene	8		72333
Human Homolog	KIAA0992[palladin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 88 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCAGAAGGCC (2) GAAATTTAAA GCAGTTTAAA (2) GGAAGTCTTC TGGGTGCTAC 21.2 0.0212 Cb medulloblastoma CCAGAAGGCC (2) GAAATTTAAA GCAGTTTAAA (2) TGGGAGTGTG TGGGTGCTAC 20.7 0.0207 P8 GC+1d culture CCAGAAGGCC (2) GAAATTTAAA GCAGTTTAAA (2) GCCCTTTCTC 47.8 0.0478 P8 GC+SHH+1d culture CAAAACATAT CCAGAAGGCC (2) GAAATTTAAA GCAGTTTAAA (2) GGAAGTCTTC TGGGTGCTAC 80.8 0.0808 3T3 fibroblasts CCAGAAGGCC (2) GAAATTTAAA GCTACATCTG (2) GGCCTATCTC (3) TGGGTGCTAC 52.5 0.0525 E15 cortex CCAGAAGGCC (2) GAAATTTAAA TGGGTGCTAC 59.3 0.0593 P1 cortex CCAGAAGGGG GAAATTTAAA GCAGTTTAAA (2) 49.9 0.0499 Hypothalamus AAAACCTGAA CCAGAAGGCC (2) GAAATTTAAA 9 0.009 E12.5 retina CCAGAAGGCC (2) GAAATTTAAA GCAGTTTAAA (2) 93.9 0.0939 E14.5 retina AAAACCTGAA GAAATTTAAA GCAGTTTAAA (2) GCCCTTTCTC TGGGTGCTAC 29.1 0.0291 E16.5 retina GAAATTTAAA GCAGTTTAAA (2) GCCCTTTCTC GCTACATCTG (2) 36.2 0.0362 E18.5 retina GAAATTTAAA GCAGTTTAAA (2) TGGGTGCTAC 60 0.06 P0.5 retina AAAACCTGAA CCAGAAGGCC (2) CCAGAAGGGG GAAATTTAAA GGAAGTCTTC 51.2 0.0512 P2.5 retina GAAATTTAAA GCCCTTTCTC GCTACATCTG (2) GGCCTATCTC (3) TGGGTGCTAC 84.5 0.0845 P4.5 retina CCAGAAGGCC (2) CCAGAAGGGG GAAATTTAAA GCAGTTTAAA (2) GCCCTTTCTC TGGGTGCTAC 59.5 0.0595 P6.5 retina CAAAACATAT CCAGAAGGGG GAAATTTAAA GCAGTTTAAA (2) GCCCTTTCTC TGGGTGCTAC 25.2 0.0252 P10.5 crx- retina CCAGAAGGCC (2) GAAATTTAAA GCAGTTTAAA (2) GGCCTATCTC (3) 20.5 0.0205 P10.5 crx+ retina CAAAACATAT CCAGAAGGCC (2) CCAGAAGGGG GAAATTTAAA GCAGTTTAAA (2) GCCCTTTCTC TGGGTGCTAC 32.5 0.0325 Adult retinal CCAGAAGGGG GAAATTTAAA TGGGTGCTAC 9.3 0.0093 ONL GAAATTTAAA GCAGTTTAAA (2) TGGGTGCTAC 15.3 0.0153