Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.300639	0610009L18Rik	RIKEN cDNA 0610009L18 gene	11		66838
Mm.300639	Actg1	actin, gamma, cytoplasmic 1	11		11465
Gene Ontology	cytoskeleton | cytoskeleton organization and biogenesis | structural constituent of cytoskeleton
Human Homolog	ACTG1[actin, gamma 1] | ACTG1[actin, gamma 1] | ACTG1[actin, gamma 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 300 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAACTGGAAT (2) AACTAAGGAC (2) AAGATCCTGA (2) ACAAATTATG (2) ACACACACAC (3) AGAAAGCCCC (3) AGAACTTTGC CGGCTCGGTC (2) CTTTATTTAT GACTCTGGTG (2) GAGAAGATCT (2) GCCTCATCCT GGAGGTCCTG GGCCAGAAAG (2) GGTGTGGCTG (3) GGTTTGGAAT (2) GTAGAAAGTA TACCCAGGCA (2) TACCCCAGGC (2) TACGTAGCCA TCGTCCCAGT (2) TCTTAGGACC TGCAAAGCCG (2) TGGATCGGTC TGGCCTGGGT (2) TGGCTCAGTC (2) TGGCTCGGTC (3) TGGGCCTCGG (2) TTTTTTTTTT (2) 216.7 0.2167 Cb medulloblastoma AAACTGGAAT (2) AAGATCCTGA (2) ACAAATTATG (2) ACACACACAC (3) CTTTATTTAT GAAACCATTA GAGAAGATCT (2) GGAGGTCCTG GGGGCTGGGG (2) GGTTTGGAAT (2) TCTTAAAGAA TCTTAGGACC TGGCTCGGTC (3) TGTAAAGAAA TTTTTTTTTT (2) 110.9 0.1109 P8 GC+1d culture AAACTGGAAT (2) ACAAATTATG (2) ACACACACAC (3) AGAACTTTGC CGGCTCGGTC (2) GAAACCATTA GACTCTGGTG (2) GAGGGGAAGA GCCTCATCCT GGAGGTCCTG GGGGCTGGGG (2) GGTTTGGAAT (2) TACCCAGGCA (2) TCGTCCCAGT (2) TCTTAGGACC TGGCTCCGGT TGGCTCGGTC (3) TGGGCCTCGG (2) TGTAAAGAAA TTTTTTTTTT (2) 269 0.269 P8 GC+SHH+1d culture AAACTGGAAT (2) AACTAAGGAC (2) AAGATCCTGA (2) ACAAATTATG (2) ACACACACAC (3) AGAAAGCCCC (3) AGAACTTTGC CGGCTCGGTC (2) CTTTATTTAT GAGAAGATCT (2) GAGGGGAAGA GAGTCCTTGG (3) GCCTCATCCT GGAGGTCCTG GGCCAGAAAG (2) GGGGCTGGGG (2) GGTTTGGAAT (2) GTAGAAAGTA TCTTAAAGAA TCTTAGGACC TGGATCGGTC TGGCTCCGGT TGGCTCGGTC (3) TTTTTTTTTT (2) 176 0.176 3T3 fibroblasts AAGATCCTGA (2) GAGAAGATCT (2) TGGCTCCGGT TGGCTCGGTC (3) 318.9 0.3189 E15 cortex AAACTGGAAT (2) AAGATCCTGA (2) CGGCTCGGTC (2) GAGAAGATCT (2) GCCAAGATCT GCCTCATCCT GGTGTGGCTG (3) TACCCAGGCA (2) TCTTAGGACC TGGCCCGGTC (2) TGGCTCGGCA TGGCTCGGTC (3) TTTTTTTTTT (2) 311.3 0.3113 P1 cortex ACAAATTATG (2) ACAAATTTGG (2) GCCAAGATCT GGCCAGAAAG (2) GGTAAAGAAT (2) GGTTTGGAAT (2) TGGCTCGGCA TGGCTCGGTC (3) TTTTTTTTTT (2) 172.5 0.1725 Hypothalamus AAACTGGAAT (2) AAGATCCTGA (2) ACAAATTATG (2) ACAAATTTGG (2) AGAACTTTGC CTTTATTTAT GAAACCATTA GAGAAGATCT (2) GCCTCATCCT GGAGGTCCTG GGGGCTGGGG (2) GGTTTGGAAT (2) TACCCCAGGC (2) TGGCTCGGTC (3) TGTAAAGAAA TTTTTTTTTT (2) 90.5 0.0905 E12.5 retina AAACTGGAAT (2) ACAAATTATG (2) GAAACCATTA GAGGGGAAGA GGAGGTCCTG GGTTTGGAAT (2) TACGTAGCCA TCTTAAAGAA TGGATCGGTC TGGCTCGGTC (3) TTTTTTTTTT (2) 67.8 0.0678 E14.5 retina AAACTGGAAT (2) AAGATCCTGA (2) AATAAAAGAA ACAAATTATG (2) ACACACACAC (3) AGAACTTTGC CTTTATTTAT GAAGAAAAAG (2) GAAGATTCTG (2) GAGTCCTTGG (3) GCCAAGATCT GGGGCTGGGG (2) GGTGTGGCTG (3) GGTTTGGAAT (2) TACCCAGGCA (2) TACGTAGCCA TCGTCCCAGT (2) TCTTAAAGAA TCTTAGGACC TGGCTCGGTC (3) TTTTTTTTTT (2) 118.1 0.1181 E16.5 retina AAACTGGAAT (2) AATAAAAGAA ACAAATTATG (2) ACACACACAC (3) AGAACTTTGC GACTCTGGTG (2) GAGTCCTTGG (3) GCCAAGATCT GCCTCATCCT GGGGCTGGGG (2) GGTTTGGAAT (2) GTAGAAAGTA TACCCAGGCA (2) TACGTAGCCA TCTTAGGACC TGGATCGGTC TGGCTCGGTC (3) TGTAAAGAAA TTTTTTTTTT (2) 99.4 0.0994 E18.5 retina AAACTGGAAT (2) AATAAAAGAA ACAAATTATG (2) ACACACACAC (3) AGAAAGCCCC (3) GACTCTGGTG (2) GGGGCTGGGG (2) GGTTTGGAAT (2) TACCCAGGCA (2) TACCCCAGGC (2) TCTTAGGACC TGGCCTGGGT (2) TGGCTCGGTC (3) TGGGCCTCGG (2) TTTTTTTTTT (2) 74.3 0.0743 P0.5 retina AAACTGGAAT (2) ACAAATTATG (2) ACAAATTTGG (2) ACACACACAC (3) AGAACTTTGC CGGCTCGGTC (2) GAGTCCTTGG (3) GGTTTGGAAT (2) TACCCAGGCA (2) TCTTAGGACC TGGCCCGGTC (2) TGGCTCGGTC (3) TGTAAAGAAA TTTTTTTTTT (2) 208.2 0.2082 P2.5 retina AAAGATCCCT (3) AATAAAAGAA ACAAATTATG (2) ACACACACAC (3) AGAACTTTGC GCCAAGATCT GGAGGTCCTG GGTAAAGAAT (2) GGTGTGGCTG (3) GGTTTGGAAT (2) GTAGAAAGTA TCTTAGGACC TGGCTCGGTC (3) TTTTTTTTTT (2) 91.8 0.0918 P4.5 retina AAACTGGAAT (2) AATAAAAGAA ACAAATTATG (2) ACACACACAC (3) AGAACTTTGC CTTTATTTAT GGAGGTCCTG GGTTTGGAAT (2) TCTTAGGACC TGGCTCAGTC (2) TGGCTCGGTC (3) TTTTTTTTTT (2) 101 0.101 P6.5 retina AAACTGGAAT (2) AACTAAGGAC (2) AATAAAAGAA ACAAATTATG (2) ACACACACAC (3) AGAACTTTGC GAAACCATTA GAAGAAAAAG (2) GAGAAGATCT (2) GCCTCATCCT GGAGGTCCTG GGCCAGAAAG (2) GGGGCTGGGG (2) GGTTTGGAAT (2) TACCCAGGCA (2) TCTTAAAGAA TCTTAGGACC TGGCTCAGTC (2) TGGCTCGGTC (3) TTTTTTTTTT (2) 120.3 0.1203 P10.5 crx- retina AAACTGGAAT (2) AAAGATCCCT (3) ACAAATTATG (2) ACACACACAC (3) GAAGAAAAAG (2) GAAGATTCTG (2) GGGGCTGGGG (2) GGTTTGGAAT (2) TCTTAGGACC TGGCTCGGCA TGGCTCGGTC (3) 107.9 0.1079 P10.5 crx+ retina AATAAAAGAA ACAAATTATG (2) ACACACACAC (3) AGAACTTTGC GAGAAGATCT (2) GAGGGGAAGA GCCAAGATCT GGAGGTCCTG GGGGCTGGGG (2) TACCCAGGCA (2) TCTTAGGACC TGGCTCGGTC (3) TGTAAAGAAA TTTTTTTTTT (2) 92.1 0.0921 Adult retinal AAAGATCCCT (3) ACAAATTATG (2) ACACACACAC (3) AGAACTTTGC GAAACCATTA GGAGGTCCTG GGGGCTGGGG (2) GGTTTGGAAT (2) TCTTAAAGAA TGGATCGGTC TGGCCCGGTC (2) TGGCTCGGTC (3) TTTTTTTTTT (2) 104.1 0.1041 ONL ACAAATTATG (2) ACACACACAC (3) TCTTAAAGAA TGGCTCGGTC (3) TGTAAAGAAA TTTTTTTTTT (2) 24.8 0.0248