Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.300639	0610009L18Rik	RIKEN cDNA 0610009L18 gene	11		66838
Mm.300639	Actg1	actin, gamma, cytoplasmic 1	11		11465
Gene Ontology	cytoskeleton | cytoskeleton organization and biogenesis | structural constituent of cytoskeleton
Human Homolog	ACTG1[actin, gamma 1] | ACTG1[actin, gamma 1] | ACTG1[actin, gamma 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 300 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGCTCGGTC (6) 110.9 0.1109 P8 Cb GC GAGAAGATCT (13) 19.6 0.0196 P8 Cb GC GGTTTGGAAT (6) 11.4 0.0114 P8 Cb GC AAGATCCTGA (11) 6.5 0.0065 P8 Cb GC GACTCTGGTG (5) 6.5 0.0065 P8 Cb GC TACGTAGCCA (3) 4.9 0.0049 P8 Cb GC TGCAAAGCCG (5) 4.9 0.0049 P8 Cb GC TGGCTCAGTC (3) 4.9 0.0049 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC AAACTGGAAT (6) 3.3 0.0033 P8 Cb GC ACAAATTATG (5) 3.3 0.0033 P8 Cb GC ACACACACAC (12) 3.3 0.0033 P8 Cb GC TACCCAGGCA (8) 3.3 0.0033 P8 Cb GC TGGATCGGTC (4) 3.3 0.0033 P8 Cb GC TGGCCTGGGT (2) 3.3 0.0033 P8 Cb GC AACTAAGGAC (2) 1.6 0.0016 P8 Cb GC AGAAAGCCCC (4) 1.6 0.0016 P8 Cb GC AGAACTTTGC (3) 1.6 0.0016 P8 Cb GC CGGCTCGGTC (2) 1.6 0.0016 P8 Cb GC CTTTATTTAT (3) 1.6 0.0016 P8 Cb GC GCCTCATCCT (3) 1.6 0.0016 P8 Cb GC GGAGGTCCTG (7) 1.6 0.0016 P8 Cb GC GGCCAGAAAG (6) 1.6 0.0016 P8 Cb GC GGTGTGGCTG (5) 1.6 0.0016 P8 Cb GC GTAGAAAGTA (3) 1.6 0.0016 P8 Cb GC TACCCCAGGC (6) 1.6 0.0016 P8 Cb GC TCGTCCCAGT (2) 1.6 0.0016 P8 Cb GC TCTTAGGACC (3) 1.6 0.0016 P8 Cb GC TGGGCCTCGG (2) 1.6 0.0016 Cb medulloblastoma TGGCTCGGTC (6) 53.2 0.0532 Cb medulloblastoma ACAAATTATG (5) 11.6 0.0116 Cb medulloblastoma GGTTTGGAAT (6) 11.6 0.0116 Cb medulloblastoma GGAGGTCCTG (7) 4.6 0.0046 Cb medulloblastoma GGGGCTGGGG (9) 4.6 0.0046 Cb medulloblastoma TCTTAAAGAA (4) 4.6 0.0046 Cb medulloblastoma AAACTGGAAT (6) 2.3 0.0023 Cb medulloblastoma AAGATCCTGA (11) 2.3 0.0023 Cb medulloblastoma ACACACACAC (12) 2.3 0.0023 Cb medulloblastoma CTTTATTTAT (3) 2.3 0.0023 Cb medulloblastoma GAAACCATTA (5) 2.3 0.0023 Cb medulloblastoma GAGAAGATCT (13) 2.3 0.0023 Cb medulloblastoma TCTTAGGACC (3) 2.3 0.0023 Cb medulloblastoma TGTAAAGAAA (5) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TGGCTCGGTC (6) 207.8 0.2078 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture ACAAATTATG (5) 8 0.008 P8 GC+1d culture GGTTTGGAAT (6) 6.8 0.0068 P8 GC+1d culture TGGCTCCGGT (3) 4.6 0.0046 P8 GC+1d culture ACACACACAC (12) 3.4 0.0034 P8 GC+1d culture CGGCTCGGTC (2) 3.4 0.0034 P8 GC+1d culture GGAGGTCCTG (7) 3.4 0.0034 P8 GC+1d culture TCTTAGGACC (3) 3.4 0.0034 P8 GC+1d culture AAACTGGAAT (6) 2.3 0.0023 P8 GC+1d culture TGTAAAGAAA (5) 2.3 0.0023 P8 GC+1d culture AGAACTTTGC (3) 1.1 0.0011 P8 GC+1d culture GAAACCATTA (5) 1.1 0.0011 P8 GC+1d culture GACTCTGGTG (5) 1.1 0.0011 P8 GC+1d culture GAGGGGAAGA (3) 1.1 0.0011 P8 GC+1d culture GCCTCATCCT (3) 1.1 0.0011 P8 GC+1d culture GGGGCTGGGG (9) 1.1 0.0011 P8 GC+1d culture TACCCAGGCA (8) 1.1 0.0011 P8 GC+1d culture TCGTCCCAGT (2) 1.1 0.0011 P8 GC+1d culture TGGGCCTCGG (2) 1.1 0.0011 P8 GC+SHH+1d culture TGGCTCGGTC (6) 110.1 0.1101 P8 GC+SHH+1d culture GGTTTGGAAT (6) 11.7 0.0117 P8 GC+SHH+1d culture ACAAATTATG (5) 10.5 0.0105 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture ACACACACAC (12) 4.7 0.0047 P8 GC+SHH+1d culture TCTTAGGACC (3) 4.7 0.0047 P8 GC+SHH+1d culture GCCTCATCCT (3) 3.5 0.0035 P8 GC+SHH+1d culture GGGGCTGGGG (9) 3.5 0.0035 P8 GC+SHH+1d culture GAGAAGATCT (13) 2.3 0.0023 P8 GC+SHH+1d culture GGAGGTCCTG (7) 2.3 0.0023 P8 GC+SHH+1d culture AAACTGGAAT (6) 1.2 0.0012 P8 GC+SHH+1d culture AACTAAGGAC (2) 1.2 0.0012 P8 GC+SHH+1d culture AAGATCCTGA (11) 1.2 0.0012 P8 GC+SHH+1d culture AGAAAGCCCC (4) 1.2 0.0012 P8 GC+SHH+1d culture AGAACTTTGC (3) 1.2 0.0012 P8 GC+SHH+1d culture CGGCTCGGTC (2) 1.2 0.0012 P8 GC+SHH+1d culture CTTTATTTAT (3) 1.2 0.0012 P8 GC+SHH+1d culture GAGGGGAAGA (3) 1.2 0.0012 P8 GC+SHH+1d culture GAGTCCTTGG (6) 1.2 0.0012 P8 GC+SHH+1d culture GGCCAGAAAG (6) 1.2 0.0012 P8 GC+SHH+1d culture GTAGAAAGTA (3) 1.2 0.0012 P8 GC+SHH+1d culture TCTTAAAGAA (4) 1.2 0.0012 P8 GC+SHH+1d culture TGGATCGGTC (4) 1.2 0.0012 P8 GC+SHH+1d culture TGGCTCCGGT (3) 1.2 0.0012 3T3 fibroblasts TGGCTCGGTC (6) 301.4 0.3014 3T3 fibroblasts GAGAAGATCT (13) 7 0.007 3T3 fibroblasts TGGCTCCGGT (3) 7 0.007 3T3 fibroblasts AAGATCCTGA (11) 3.5 0.0035 E15 cortex TGGCTCGGTC (6) 217.7 0.2177 E15 cortex TACCCAGGCA (8) 19.8 0.0198 E15 cortex AAACTGGAAT (6) 14.8 0.0148 E15 cortex CGGCTCGGTC (2) 9.9 0.0099 E15 cortex GCCTCATCCT (3) 9.9 0.0099 E15 cortex AAGATCCTGA (11) 4.9 0.0049 E15 cortex GAGAAGATCT (13) 4.9 0.0049 E15 cortex GCCAAGATCT (5) 4.9 0.0049 E15 cortex GGTGTGGCTG (5) 4.9 0.0049 E15 cortex TCTTAGGACC (3) 4.9 0.0049 E15 cortex TGGCCCGGTC (3) 4.9 0.0049 E15 cortex TGGCTCGGCA (3) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex TGGCTCGGTC (6) 113.6 0.1136 P1 cortex GGTTTGGAAT (6) 18.2 0.0182 P1 cortex GGTAAAGAAT (3) 9.1 0.0091 P1 cortex TGGCTCGGCA (3) 9.1 0.0091 P1 cortex ACAAATTATG (5) 4.5 0.0045 P1 cortex ACAAATTTGG (4) 4.5 0.0045 P1 cortex GCCAAGATCT (5) 4.5 0.0045 P1 cortex GGCCAGAAAG (6) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TGGCTCGGTC (6) 41.7 0.0417 Hypothalamus ACAAATTATG (5) 9.1 0.0091 Hypothalamus GGAGGTCCTG (7) 9.1 0.0091 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus AGAACTTTGC (3) 3.6 0.0036 Hypothalamus AAACTGGAAT (6) 1.8 0.0018 Hypothalamus AAGATCCTGA (11) 1.8 0.0018 Hypothalamus ACAAATTTGG (4) 1.8 0.0018 Hypothalamus CTTTATTTAT (3) 1.8 0.0018 Hypothalamus GAAACCATTA (5) 1.8 0.0018 Hypothalamus GAGAAGATCT (13) 1.8 0.0018 Hypothalamus GCCTCATCCT (3) 1.8 0.0018 Hypothalamus GGGGCTGGGG (9) 1.8 0.0018 Hypothalamus GGTTTGGAAT (6) 1.8 0.0018 Hypothalamus TACCCCAGGC (6) 1.8 0.0018 Hypothalamus TGTAAAGAAA (5) 1.8 0.0018 E12.5 retina TGGCTCGGTC (6) 26.3 0.0263 E12.5 retina ACAAATTATG (5) 9.4 0.0094 E12.5 retina GGTTTGGAAT (6) 9.4 0.0094 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina TCTTAAAGAA (4) 3.8 0.0038 E12.5 retina AAACTGGAAT (6) 1.9 0.0019 E12.5 retina GAAACCATTA (5) 1.9 0.0019 E12.5 retina GAGGGGAAGA (3) 1.9 0.0019 E12.5 retina GGAGGTCCTG (7) 1.9 0.0019 E12.5 retina TACGTAGCCA (3) 1.9 0.0019 E12.5 retina TGGATCGGTC (4) 1.9 0.0019 E14.5 retina TGGCTCGGTC (6) 34.6 0.0346 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina ACAAATTATG (5) 9.1 0.0091 E14.5 retina GGGGCTGGGG (9) 7.3 0.0073 E14.5 retina GGTTTGGAAT (6) 5.5 0.0055 E14.5 retina TCTTAGGACC (3) 5.5 0.0055 E14.5 retina AAACTGGAAT (6) 3.6 0.0036 E14.5 retina GAAGATTCTG (4) 3.6 0.0036 E14.5 retina TACGTAGCCA (3) 3.6 0.0036 E14.5 retina AAGATCCTGA (11) 1.8 0.0018 E14.5 retina AATAAAAGAA (3) 1.8 0.0018 E14.5 retina ACACACACAC (12) 1.8 0.0018 E14.5 retina AGAACTTTGC (3) 1.8 0.0018 E14.5 retina CTTTATTTAT (3) 1.8 0.0018 E14.5 retina GAAGAAAAAG (22) 1.8 0.0018 E14.5 retina GAGTCCTTGG (6) 1.8 0.0018 E14.5 retina GCCAAGATCT (5) 1.8 0.0018 E14.5 retina GGTGTGGCTG (5) 1.8 0.0018 E14.5 retina TACCCAGGCA (8) 1.8 0.0018 E14.5 retina TCGTCCCAGT (2) 1.8 0.0018 E14.5 retina TCTTAAAGAA (4) 1.8 0.0018 E16.5 retina TGGCTCGGTC (6) 38 0.038 E16.5 retina AAACTGGAAT (6) 10.9 0.0109 E16.5 retina GGTTTGGAAT (6) 9.1 0.0091 E16.5 retina TCTTAGGACC (3) 7.2 0.0072 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina ACAAATTATG (5) 3.6 0.0036 E16.5 retina TGTAAAGAAA (5) 3.6 0.0036 E16.5 retina AATAAAAGAA (3) 1.8 0.0018 E16.5 retina ACACACACAC (12) 1.8 0.0018 E16.5 retina AGAACTTTGC (3) 1.8 0.0018 E16.5 retina GACTCTGGTG (5) 1.8 0.0018 E16.5 retina GAGTCCTTGG (6) 1.8 0.0018 E16.5 retina GCCAAGATCT (5) 1.8 0.0018 E16.5 retina GCCTCATCCT (3) 1.8 0.0018 E16.5 retina GGGGCTGGGG (9) 1.8 0.0018 E16.5 retina GTAGAAAGTA (3) 1.8 0.0018 E16.5 retina TACCCAGGCA (8) 1.8 0.0018 E16.5 retina TACGTAGCCA (3) 1.8 0.0018 E16.5 retina TGGATCGGTC (4) 1.8 0.0018 E18.5 retina TGGCTCGGTC (6) 18.2 0.0182 E18.5 retina ACAAATTATG (5) 12.7 0.0127 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina GGTTTGGAAT (6) 9.1 0.0091 E18.5 retina GGGGCTGGGG (9) 3.6 0.0036 E18.5 retina TACCCAGGCA (8) 3.6 0.0036 E18.5 retina AAACTGGAAT (6) 1.8 0.0018 E18.5 retina AATAAAAGAA (3) 1.8 0.0018 E18.5 retina ACACACACAC (12) 1.8 0.0018 E18.5 retina AGAAAGCCCC (4) 1.8 0.0018 E18.5 retina GACTCTGGTG (5) 1.8 0.0018 E18.5 retina TACCCCAGGC (6) 1.8 0.0018 E18.5 retina TCTTAGGACC (3) 1.8 0.0018 E18.5 retina TGGCCTGGGT (2) 1.8 0.0018 E18.5 retina TGGGCCTCGG (2) 1.8 0.0018 P0.5 retina TGGCTCGGTC (6) 149.2 0.1492 P0.5 retina ACAAATTATG (5) 11.8 0.0118 P0.5 retina TCTTAGGACC (3) 9.8 0.0098 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina ACAAATTTGG (4) 3.9 0.0039 P0.5 retina ACACACACAC (12) 3.9 0.0039 P0.5 retina AGAACTTTGC (3) 3.9 0.0039 P0.5 retina GGTTTGGAAT (6) 3.9 0.0039 P0.5 retina AAACTGGAAT (6) 2 0.002 P0.5 retina CGGCTCGGTC (2) 2 0.002 P0.5 retina GAGTCCTTGG (6) 2 0.002 P0.5 retina TACCCAGGCA (8) 2 0.002 P0.5 retina TGGCCCGGTC (3) 2 0.002 P0.5 retina TGTAAAGAAA (5) 2 0.002 P2.5 retina TGGCTCGGTC (6) 31.7 0.0317 P2.5 retina AATAAAAGAA (3) 14.1 0.0141 P2.5 retina TCTTAGGACC (3) 10.6 0.0106 P2.5 retina AGAACTTTGC (3) 8.8 0.0088 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina ACACACACAC (12) 3.5 0.0035 P2.5 retina GGTTTGGAAT (6) 3.5 0.0035 P2.5 retina AAAGATCCCT (8) 1.8 0.0018 P2.5 retina ACAAATTATG (5) 1.8 0.0018 P2.5 retina GCCAAGATCT (5) 1.8 0.0018 P2.5 retina GGAGGTCCTG (7) 1.8 0.0018 P2.5 retina GGTAAAGAAT (3) 1.8 0.0018 P2.5 retina GGTGTGGCTG (5) 1.8 0.0018 P2.5 retina GTAGAAAGTA (3) 1.8 0.0018 P4.5 retina TGGCTCGGTC (6) 29.7 0.0297 P4.5 retina AATAAAAGAA (3) 19.8 0.0198 P4.5 retina TCTTAGGACC (3) 9.9 0.0099 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina ACAAATTATG (5) 7.9 0.0079 P4.5 retina AAACTGGAAT (6) 5.9 0.0059 P4.5 retina ACACACACAC (12) 5.9 0.0059 P4.5 retina CTTTATTTAT (3) 4 0.004 P4.5 retina AGAACTTTGC (3) 2 0.002 P4.5 retina GGAGGTCCTG (7) 2 0.002 P4.5 retina GGTTTGGAAT (6) 2 0.002 P4.5 retina TGGCTCAGTC (3) 2 0.002 P6.5 retina TGGCTCGGTC (6) 51.7 0.0517 P6.5 retina GGAGGTCCTG (7) 10 0.01 P6.5 retina ACAAATTATG (5) 8.3 0.0083 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina AGAACTTTGC (3) 6.7 0.0067 P6.5 retina AATAAAAGAA (3) 5 0.005 P6.5 retina ACACACACAC (12) 5 0.005 P6.5 retina GGGGCTGGGG (9) 3.3 0.0033 P6.5 retina TCTTAGGACC (3) 3.3 0.0033 P6.5 retina AAACTGGAAT (6) 1.7 0.0017 P6.5 retina AACTAAGGAC (2) 1.7 0.0017 P6.5 retina GAAACCATTA (5) 1.7 0.0017 P6.5 retina GAAGAAAAAG (22) 1.7 0.0017 P6.5 retina GAGAAGATCT (13) 1.7 0.0017 P6.5 retina GCCTCATCCT (3) 1.7 0.0017 P6.5 retina GGCCAGAAAG (6) 1.7 0.0017 P6.5 retina GGTTTGGAAT (6) 1.7 0.0017 P6.5 retina TACCCAGGCA (8) 1.7 0.0017 P6.5 retina TCTTAAAGAA (4) 1.7 0.0017 P6.5 retina TGGCTCAGTC (3) 1.7 0.0017 P10.5 crx- retina TGGCTCGGTC (6) 65 0.065 P10.5 crx- retina GGTTTGGAAT (6) 9.3 0.0093 P10.5 crx- retina AAACTGGAAT (6) 7.4 0.0074 P10.5 crx- retina ACAAATTATG (5) 7.4 0.0074 P10.5 crx- retina ACACACACAC (12) 5.6 0.0056 P10.5 crx- retina GGGGCTGGGG (9) 3.7 0.0037 P10.5 crx- retina AAAGATCCCT (8) 1.9 0.0019 P10.5 crx- retina GAAGAAAAAG (22) 1.9 0.0019 P10.5 crx- retina GAAGATTCTG (4) 1.9 0.0019 P10.5 crx- retina TCTTAGGACC (3) 1.9 0.0019 P10.5 crx- retina TGGCTCGGCA (3) 1.9 0.0019 P10.5 crx+ retina TGGCTCGGTC (6) 42.3 0.0423 P10.5 crx+ retina GGAGGTCCTG (7) 13.5 0.0135 P10.5 crx+ retina ACAAATTATG (5) 7.7 0.0077 P10.5 crx+ retina GGGGCTGGGG (9) 5.8 0.0058 P10.5 crx+ retina ACACACACAC (12) 3.8 0.0038 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina AATAAAAGAA (3) 1.9 0.0019 P10.5 crx+ retina AGAACTTTGC (3) 1.9 0.0019 P10.5 crx+ retina GAGAAGATCT (13) 1.9 0.0019 P10.5 crx+ retina GAGGGGAAGA (3) 1.9 0.0019 P10.5 crx+ retina GCCAAGATCT (5) 1.9 0.0019 P10.5 crx+ retina TACCCAGGCA (8) 1.9 0.0019 P10.5 crx+ retina TCTTAGGACC (3) 1.9 0.0019 P10.5 crx+ retina TGTAAAGAAA (5) 1.9 0.0019 Adult retinal TGGCTCGGTC (6) 53.7 0.0537 Adult retinal GGGGCTGGGG (9) 9.3 0.0093 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal ACAAATTATG (5) 5.6 0.0056 Adult retinal ACACACACAC (12) 5.6 0.0056 Adult retinal GGTTTGGAAT (6) 5.6 0.0056 Adult retinal AGAACTTTGC (3) 3.7 0.0037 Adult retinal GGAGGTCCTG (7) 3.7 0.0037 Adult retinal AAAGATCCCT (8) 1.9 0.0019 Adult retinal GAAACCATTA (5) 1.9 0.0019 Adult retinal TCTTAAAGAA (4) 1.9 0.0019 Adult retinal TGGATCGGTC (4) 1.9 0.0019 Adult retinal TGGCCCGGTC (3) 1.9 0.0019 ONL TCTTAAAGAA (4) 7.7 0.0077 ONL ACAAATTATG (5) 5.7 0.0057 ONL TGGCTCGGTC (6) 3.8 0.0038 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL ACACACACAC (12) 1.9 0.0019 ONL TGTAAAGAAA (5) 1.9 0.0019