Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30071	Laptm4a	lysosomal-associated protein transmembrane 4A	12		17775
Gene Ontology	integral to membrane | transport
Human Homolog	LAPTM4A[lysosomal-associated protein transmembrane 4 alpha]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 144 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (2) CAACCATCAT CTTCTCATTT TCCTTAAAAA TTTTCTTTTT (6) 262.6 0.2626 Cb medulloblastoma AAAAAAAAAA (2) CAACCATCAT CTGTTAGTCG (3) CTTCTCATTT GCTTCTCATT (2) 839.4 0.8394 P8 GC+1d culture AAAAAAAAAA (2) CAACCATCAT CCAGCTGTCA CCAGCTGTCT CTTCTCATTT GAGACCCCTC (3) GCTTCTCATT (2) TATTAATAAG TCCTTAAAAA TTTTCTTTTT (6) 287.6 0.2876 P8 GC+SHH+1d culture AAAAAAAAAA (2) AACACCATCC CAACCATCAT CCAGCTGTCA CCAGCTGTCT CTTCTCATTT GAGACCCCTC (3) TTTTCTTTTT (6) 326.8 0.3268 3T3 fibroblasts AAAAAAAAAA (2) CAACCATCAT CCAGCTGTCA CTTCTCATTT GAGACCCCTC (3) GCTTCTCATT (2) TTTTCTTTTT (6) 87.5 0.0875 E15 cortex AAAAAAAAAA (2) CTTCTCATTT 227.6 0.2276 P1 cortex AAAAAAAAAA (2) CAACCATCAT CTTCTCATTT GAGACCCCTC (3) TCCTTAAAAA 281.7 0.2817 Hypothalamus AAAAAAAAAA (2) CAACCATCAT CCAGCTGTCT CTTCTCATTT GAGACCCCTC (3) GCTTCTCATT (2) TATTAATAAG TTTTCTTTTT (6) TTTTTCATTT 162.9 0.1629 E12.5 retina AAAAAAAAAA (2) AACACCATCC CAACCATCAT CCAGCTGTCA CCAGCTGTCT CTTCTCATTT TATTAATAAG TCCTTAAAAA TTTTCTTTTT (6) 182.2 0.1822 E14.5 retina AAAAAAAAAA (2) CAACCATCAT CAGCTTGTCA (5) CTGTTAGTCG (3) CTTCTCATTT GAGACCCCTC (3) GCTTCTCATT (2) TATTAATAAG TTTTCTTTTT (6) 143.8 0.1438 E16.5 retina AAAAAAAAAA (2) AACACCATCC CAACCATCAT CAGCTTGTCA (5) CTGTTAGTCG (3) CTTCTCATTT CTTTTCATTT (2) GAGACCCCTC (3) GCTTCTCATT (2) GTGGTCACAA TATTAATAAG TTTTCTTTTT (6) 85 0.085 E18.5 retina AAAAAAAAAA (2) CAACCATCAT CAATGGACAG (2) CTTCTCATTT GAGACCCCTC (3) TATTAATAAG TCCTTAAAAA TTTTCTTTTT (6) 429.2 0.4292 P0.5 retina AAAAAAAAAA (2) CAACCATCAT CCAGCTGTCT CTGTTAGTCG (3) CTTCTCATTT GAGACCCCTC (3) GTGGTCACAA TATTAATAAG TCCTTAAAAA 157.2 0.1572 P2.5 retina AAAAAAAAAA (2) CAACCATCAT CTGGTTTATG CTTCTCATTT TATTAATAAG TCCTTAAAAA TTTTCTTTTT (6) 373.2 0.3732 P4.5 retina AAAAAAAAAA (2) CAACCATCAT CTTCTCATTT GAGACCCCTC (3) 322.9 0.3229 P6.5 retina AAAAAAAAAA (2) AACACCATCC CAACCATCAT CAATGGACAG (2) CCAGCTGTCA CTGGTTTATG CTTCTCATTT CTTTTCATTT (2) TATTAATAAG TCCTTAAAAA TTTTCTTTTT (6) TTTTTCATTT 333.6 0.3336 P10.5 crx- retina AAAAAAAAAA (2) CAACCATCAT CTTCTCATTT CTTTTCATTT (2) GTGGTCACAA TATTAATAAG 80 0.08 P10.5 crx+ retina AAAAAAAAAA (2) CAACCATCAT CCAGCTGTCA CTGTTAGTCG (3) CTTCTCATTT CTTTTCATTT (2) TTTTCTTTTT (6) 134.5 0.1345 Adult retinal AAAAAAAAAA (2) CAACCATCAT CTTCTCATTT GAGACCCCTC (3) GTGGTCACAA 77.9 0.0779 ONL AAAAAAAAAA (2) CTGGTTTATG CTGTTAGTCG (3) CTTCTCATTT TTTTCTTTTT (6) 118.6 0.1186