Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.302013
Frag1
FGF receptor activating protein 1
7
233575
Gene Ontology
receptor activity
Human Homolog
FRAG1[FGF receptor activating protein 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 123 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
355
)
52.2
0.0522
P8 Cb GC
CCTGTAATCC (
34
)
6.5
0.0065
P8 Cb GC
TGCCACCAAA (
4
)
6.5
0.0065
P8 Cb GC
CTCCTCACCT
4.9
0.0049
P8 Cb GC
CACCACCACT (
20
)
1.6
0.0016
P8 Cb GC
TGCCACCATA
(
6
)
1.6
0.0016
P8 Cb GC
TGCCACCATT (
3
)
1.6
0.0016
Cb medulloblastoma
CCTTTAATCC (
355
)
41.6
0.0416
Cb medulloblastoma
CCTGTAATCC (
34
)
11.6
0.0116
Cb medulloblastoma
TGCCACCAAA (
4
)
6.9
0.0069
Cb medulloblastoma
TGCCACCATT (
3
)
4.6
0.0046
Cb medulloblastoma
TGCCACCATA
(
6
)
2.3
0.0023
Cb medulloblastoma
TGCCCAGGAC
(
9
)
2.3
0.0023
P8 GC+1d culture
CCTTTAATCC (
355
)
32
0.032
P8 GC+1d culture
TGCCACCAAA (
4
)
6.8
0.0068
P8 GC+1d culture
CACCACCACT (
20
)
5.7
0.0057
P8 GC+1d culture
TGCCCAGGAC
(
9
)
3.4
0.0034
P8 GC+1d culture
TCTTTAATCC (
30
)
2.3
0.0023
P8 GC+1d culture
CCTGTAATCC (
34
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTTTAATCC (
355
)
25.8
0.0258
P8 GC+SHH+1d culture
CCTGTAATCC (
34
)
4.7
0.0047
P8 GC+SHH+1d culture
TCTTTAATCC (
30
)
4.7
0.0047
P8 GC+SHH+1d culture
TGCCACCAAA (
4
)
3.5
0.0035
P8 GC+SHH+1d culture
TGCCACCATT (
3
)
2.3
0.0023
P8 GC+SHH+1d culture
TGCCCAGGAC
(
9
)
2.3
0.0023
P8 GC+SHH+1d culture
CACCACCACT (
20
)
1.2
0.0012
3T3 fibroblasts
CCTTTAATCC (
355
)
70.1
0.0701
3T3 fibroblasts
CCTGTAATCC (
34
)
10.5
0.0105
3T3 fibroblasts
TCTTTAATCC (
30
)
7
0.007
3T3 fibroblasts
TGCCACCATT (
3
)
3.5
0.0035
3T3 fibroblasts
TGCCCAGGAC
(
9
)
3.5
0.0035
E15 cortex
CCTTTAATCC (
355
)
54.4
0.0544
E15 cortex
CCTGTAATCC (
34
)
4.9
0.0049
E15 cortex
TCTTTAATCC (
30
)
4.9
0.0049
E15 cortex
TGCCCAGGAC
(
9
)
4.9
0.0049
P1 cortex
CCTTTAATCC (
355
)
154.5
0.1545
P1 cortex
CCTGTAATCC (
34
)
13.6
0.0136
P1 cortex
TCTTTAATCC (
30
)
9.1
0.0091
P1 cortex
TGCCACCAAA (
4
)
9.1
0.0091
P1 cortex
CACCACCACT (
20
)
4.5
0.0045
Hypothalamus
CCTTTAATCC (
355
)
19.9
0.0199
Hypothalamus
CACCACCACT (
20
)
5.4
0.0054
Hypothalamus
CCTGTAATCC (
34
)
5.4
0.0054
Hypothalamus
TGCCCAGGAC
(
9
)
5.4
0.0054
Hypothalamus
TGCCACCAAA (
4
)
3.6
0.0036
Hypothalamus
TGCCACCATT (
3
)
3.6
0.0036
E12.5 retina
CCTTTAATCC (
355
)
75.1
0.0751
E12.5 retina
CACCACCACT (
20
)
5.6
0.0056
E12.5 retina
TGCCACCAAA (
4
)
5.6
0.0056
E12.5 retina
CCTGTAATCC (
34
)
3.8
0.0038
E12.5 retina
TGCCACCATT (
3
)
1.9
0.0019
E14.5 retina
CCTTTAATCC (
355
)
120.3
0.1203
E14.5 retina
TCTTTAATCC (
30
)
21.9
0.0219
E14.5 retina
CCTGTAATCC (
34
)
5.5
0.0055
E14.5 retina
TGCCACCAAA (
4
)
5.5
0.0055
E14.5 retina
CACCACCACT (
20
)
3.6
0.0036
E14.5 retina
TGCCACCATA
(
6
)
1.8
0.0018
E16.5 retina
CCTTTAATCC (
355
)
68.8
0.0688
E16.5 retina
TCTTTAATCC (
30
)
9.1
0.0091
E16.5 retina
CCTGTAATCC (
34
)
3.6
0.0036
E16.5 retina
CACCACCACT (
20
)
1.8
0.0018
E16.5 retina
TGCCACCAAA (
4
)
1.8
0.0018
E16.5 retina
TGCCACCATA
(
6
)
1.8
0.0018
E16.5 retina
TGCCACCATT (
3
)
1.8
0.0018
E16.5 retina
TGCCCAGGAC
(
9
)
1.8
0.0018
E18.5 retina
CCTTTAATCC (
355
)
23.6
0.0236
E18.5 retina
TGCCACCAAA (
4
)
16.4
0.0164
E18.5 retina
CACCACCACT (
20
)
5.5
0.0055
E18.5 retina
TGCCACCATA
(
6
)
3.6
0.0036
E18.5 retina
CCTGTAATCC (
34
)
1.8
0.0018
E18.5 retina
CTCCTCACCT
1.8
0.0018
E18.5 retina
TCTTTAATCC (
30
)
1.8
0.0018
P0.5 retina
CCTTTAATCC (
355
)
72.6
0.0726
P0.5 retina
TGCCACCAAA (
4
)
5.9
0.0059
P0.5 retina
CACCACCACT (
20
)
3.9
0.0039
P0.5 retina
CCTGTAATCC (
34
)
3.9
0.0039
P0.5 retina
TCTTTAATCC (
30
)
2
0.002
P2.5 retina
CCTTTAATCC (
355
)
70.4
0.0704
P2.5 retina
TGCCACCATT (
3
)
8.8
0.0088
P2.5 retina
TGCCACCAAA (
4
)
7
0.007
P2.5 retina
CACCACCACT (
20
)
5.3
0.0053
P2.5 retina
CCTGTAATCC (
34
)
3.5
0.0035
P2.5 retina
TCTTTAATCC (
30
)
1.8
0.0018
P4.5 retina
CCTTTAATCC (
355
)
43.6
0.0436
P4.5 retina
TCTTTAATCC (
30
)
9.9
0.0099
P4.5 retina
CCTGTAATCC (
34
)
5.9
0.0059
P4.5 retina
CACCACCACT (
20
)
4
0.004
P4.5 retina
TGCCCAGGAC
(
9
)
4
0.004
P4.5 retina
TGCCACCAAA (
4
)
2
0.002
P4.5 retina
TGCCACCATA
(
6
)
2
0.002
P4.5 retina
TGCCACCATT (
3
)
2
0.002
P6.5 retina
CCTTTAATCC (
355
)
70
0.07
P6.5 retina
CACCACCACT (
20
)
5
0.005
P6.5 retina
TGCCACCATT (
3
)
5
0.005
P6.5 retina
TGCCACCAAA (
4
)
3.3
0.0033
P6.5 retina
TGCCACCATA
(
6
)
3.3
0.0033
P6.5 retina
CCTGTAATCC (
34
)
1.7
0.0017
P10.5 crx- retina
CCTTTAATCC (
355
)
63.2
0.0632
P10.5 crx- retina
CCTGTAATCC (
34
)
3.7
0.0037
P10.5 crx- retina
CACCACCACT (
20
)
1.9
0.0019
P10.5 crx- retina
TCTTTAATCC (
30
)
1.9
0.0019
P10.5 crx- retina
TGCCACCAAA (
4
)
1.9
0.0019
P10.5 crx- retina
TGCCACCATT (
3
)
1.9
0.0019
P10.5 crx+ retina
CCTTTAATCC (
355
)
38.4
0.0384
P10.5 crx+ retina
TGCCACCAAA (
4
)
11.5
0.0115
P10.5 crx+ retina
CACCACCACT (
20
)
3.8
0.0038
P10.5 crx+ retina
CCTGTAATCC (
34
)
3.8
0.0038
P10.5 crx+ retina
TGCCACCATA
(
6
)
3.8
0.0038
P10.5 crx+ retina
TCTTTAATCC (
30
)
1.9
0.0019
P10.5 crx+ retina
TGCCACCATT (
3
)
1.9
0.0019
Adult retinal
CCTTTAATCC (
355
)
129.6
0.1296
Adult retinal
TGCCACCAAA (
4
)
16.7
0.0167
Adult retinal
CACCACCACT (
20
)
9.3
0.0093
Adult retinal
TCTTTAATCC (
30
)
7.4
0.0074
Adult retinal
CCTGTAATCC (
34
)
3.7
0.0037
Adult retinal
TGCCACCATT (
3
)
1.9
0.0019
Adult retinal
TGCCCAGGAC
(
9
)
1.9
0.0019
ONL
CCTTTAATCC (
355
)
84.3
0.0843
ONL
TCTTTAATCC (
30
)
13.4
0.0134
ONL
CACCACCACT (
20
)
3.8
0.0038
ONL
CCTGTAATCC (
34
)
3.8
0.0038
ONL
TGCCACCAAA (
4
)
1.9
0.0019
ONL
TGCCACCATA
(
6
)
1.9
0.0019
