Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.305108
0610039N19Rik
RIKEN cDNA 0610039N19 gene
6
67442
Human Homolog
FLJ20296[hypothetical protein FLJ20296]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 33 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TCATTATTGA
(
3
)
1.6
0.0016
Cb medulloblastoma
TCATTATTGA
(
3
)
4.6
0.0046
P8 GC+1d culture
CAATGGCTTC
TCATTATTGA
(
3
)
TGTATGCAAA
(
2
)
11.3
0.0113
P8 GC+SHH+1d culture
GGTAGTTTGC
TCATTATTGA
(
3
)
12.8
0.0128
3T3 fibroblasts
TCTGTCCACT
3.5
0.0035
Hypothalamus
GCCTTTGAAT
(
2
)
TCATTATTGA
(
3
)
TGTATGCAAA
(
2
)
TTAAGTGAGT
TTTGGTATTG
18.1
0.0181
E12.5 retina
TTAAGTGAGT
1.9
0.0019
E14.5 retina
TCATTATTGA
(
3
)
1.8
0.0018
E16.5 retina
TCATTATTGA
(
3
)
5.4
0.0054
E18.5 retina
TTAAGTGAGT
1.8
0.0018
P2.5 retina
TCATTATTGA
(
3
)
TGTATGCAAA
(
2
)
15.9
0.0159
P4.5 retina
TCATTATTGA
(
3
)
TTTGGTATTG
4
0.004
P6.5 retina
CAATGGCTTC
TCATTATTGA
(
3
)
TTTGGTATTG
8.4
0.0084
P10.5 crx- retina
TCATTATTGA
(
3
)
1.9
0.0019
P10.5 crx+ retina
CAATGGCTTC
GGTAGTTTGC
TTAAGTGAGT
5.7
0.0057
Adult retinal
GCCTTTGAAT
(
2
)
TCATTATTGA
(
3
)
TCTGTCCACT
16.7
0.0167
ONL
TCATTATTGA
(
3
)
TCTGTCCACT
5.7
0.0057
