Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.30601
Kpna4
karyopherin (importin) alpha 4
3
16649
Mm.30601
AU021871
expressed sequence AU021871
3
99805
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 60 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCCCCTGCGC (
14
)
21.2
0.0212
P8 Cb GC
GTTAAACTTT
(
2
)
9.8
0.0098
P8 Cb GC
AACAACAGTT
(
3
)
1.6
0.0016
P8 Cb GC
TTTTTGATGA (
4
)
1.6
0.0016
Cb medulloblastoma
GCCCCTGCGC (
14
)
6.9
0.0069
Cb medulloblastoma
GTTAAACTTT
(
2
)
2.3
0.0023
P8 GC+1d culture
GCCCCTGCGC (
14
)
46.8
0.0468
P8 GC+1d culture
TTTTTGATGA (
4
)
12.6
0.0126
P8 GC+1d culture
AAAACAAAGA (
5
)
1.1
0.0011
P8 GC+SHH+1d culture
GCCCCTGCGC (
14
)
21.1
0.0211
P8 GC+SHH+1d culture
TTTTTGATGA (
4
)
10.5
0.0105
P8 GC+SHH+1d culture
CAACACTTGT
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
GTTAAACTTT
(
2
)
2.3
0.0023
3T3 fibroblasts
TTTTTGATGA (
4
)
14
0.014
E15 cortex
TTTTTGATGA (
4
)
9.9
0.0099
P1 cortex
TTTTTGATGA (
4
)
40.9
0.0409
P1 cortex
GCCCCTGCGC (
14
)
4.5
0.0045
P1 cortex
GTTAAACTTT
(
2
)
4.5
0.0045
Hypothalamus
GTTAAACTTT
(
2
)
3.6
0.0036
Hypothalamus
AACAACAGTT
(
3
)
1.8
0.0018
Hypothalamus
TTTTTGATGA (
4
)
1.8
0.0018
E12.5 retina
TTTTTGATGA (
4
)
41.3
0.0413
E12.5 retina
GCCCCTGCGC (
14
)
7.5
0.0075
E12.5 retina
GTTAAACTTT
(
2
)
1.9
0.0019
E14.5 retina
TTTTTGATGA (
4
)
9.1
0.0091
E14.5 retina
GCCCCTGCGC (
14
)
1.8
0.0018
E16.5 retina
TTTTTGATGA (
4
)
5.4
0.0054
E16.5 retina
GTTAAACTTT
(
2
)
3.6
0.0036
E16.5 retina
AAAAAATCAT
(
2
)
1.8
0.0018
E16.5 retina
GCCCCTGCGC (
14
)
1.8
0.0018
E18.5 retina
TTTTTGATGA (
4
)
10.9
0.0109
E18.5 retina
GCCCCTGCGC (
14
)
7.3
0.0073
E18.5 retina
GTTAAACTTT
(
2
)
3.6
0.0036
E18.5 retina
AAAACAAAGA (
5
)
1.8
0.0018
P0.5 retina
TTTTTGATGA (
4
)
13.7
0.0137
P0.5 retina
GCCCCTGCGC (
14
)
5.9
0.0059
P0.5 retina
AAAAAATCAT
(
2
)
2
0.002
P0.5 retina
AACAACAGTT
(
3
)
2
0.002
P2.5 retina
TTTTTGATGA (
4
)
12.3
0.0123
P2.5 retina
AAAAAATCAT
(
2
)
3.5
0.0035
P2.5 retina
GCCCCTGCGC (
14
)
1.8
0.0018
P4.5 retina
GCCCCTGCGC (
14
)
5.9
0.0059
P4.5 retina
TTTTTGATGA (
4
)
5.9
0.0059
P4.5 retina
AAAAAATCAT
(
2
)
4
0.004
P4.5 retina
GTTAAACTTT
(
2
)
4
0.004
P6.5 retina
TTTTTGATGA (
4
)
6.7
0.0067
P6.5 retina
AAAAAATCAT
(
2
)
1.7
0.0017
P6.5 retina
AAAACAAAGA (
5
)
1.7
0.0017
P6.5 retina
GTTAAACTTT
(
2
)
1.7
0.0017
P10.5 crx- retina
GCCCCTGCGC (
14
)
1.9
0.0019
P10.5 crx- retina
GTTAAACTTT
(
2
)
1.9
0.0019
P10.5 crx- retina
TTTTTGATGA (
4
)
1.9
0.0019
P10.5 crx+ retina
GCCCCTGCGC (
14
)
3.8
0.0038
P10.5 crx+ retina
TTTTTGATGA (
4
)
3.8
0.0038
Adult retinal
GCCCCTGCGC (
14
)
11.1
0.0111
Adult retinal
AAAAAATCAT
(
2
)
3.7
0.0037
ONL
GCCCCTGCGC (
14
)
5.7
0.0057
ONL
GTTAAACTTT
(
2
)
5.7
0.0057
ONL
TTTTTGATGA (
4
)
3.8
0.0038
ONL
AAAACAAAGA (
5
)
1.9
0.0019
